Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52052549 . A C CCDS4937.1:NM_002190.2:c.176aAt>aCt_NP_002181.1:p.59N>T Homo sapiens interleukin 17A (IL17A), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5n7w 3 Q16552 100.0 2e-113 X-RAY
 2018-11-14 ASN E:59 NA:NA DO NA DO DO DO NA NA NA
ASN F:59 NA:NA DO NA DO DO DO NA NA NA
6wio 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ASN C:59 NA:NA DO NA DO DO DO NA NA NA
6wir 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ASN C:59 NA:NA DO NA DO DO DO NA NA NA
2vxs 1 Q16552 100.0 1e-99 X-RAY
 2009-07-14 ASN A:41 A:36 16.0 0.1 -47.3 117.5 NA NA NA
ASN B:41 B:36 61.0 0.381 360.0 116.0 NA NA NA
ASN C:41 C:36 51.0 NA 360.0 87.4 51.0 NA NA HOH
 8.451
 O
 O
ASN D:41 D:36 74.0 0.463 360.0 112.7 74.0 0.463 0.0 HOH
 8.843
 O
 O
5hhx 1 Q16552 98.55 2e-99 X-RAY
 2016-06-01 ASN A:42 A:36 83.0 0.519 360.0 110.0 83.0 0.519 0.0
ASN B:42 NA:NA DO NA DO DO DO NA NA NA
5hi3 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ASN A:36 A:36 90.0 0.562 360.0 127.2 90.0 0.562 0.0 63O
 7.307
 N
 C23
ASN B:36 B:36 89.0 0.556 360.0 128.2 89.0 0.556 0.0 63O
HOH
 7.524
5.858
 N
N
 C23
O
5hi4 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ASN A:36 NA:NA DO NA DO DO DO NA NA NA
ASN B:36 B:36 85.0 0.531 360.0 120.9 85.0 0.531 0.0 HOH
 7.119
 C
 O
5hi5 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ASN A:36 A:36 86.0 0.537 360.0 124.6 86.0 0.537 0.0 HOH
 8.512
 C
 O
ASN B:36 B:36 86.0 0.537 360.0 125.3 86.0 0.537 0.0 63Q
HOH
 3.362
8.374
 N
C
 H4
O
5n92 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ASN A:36 NA:NA DO NA DO DO DO NA NA NA
5nan 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ASN A:36 NA:NA DO NA DO DO DO NA NA NA
ASN D:36 NA:NA DO NA DO DO DO NA NA NA
4qhu 3 Q16552 98.48 2e-95 X-RAY
 2015-08-05 ASN E:36 C:36 86.0 0.537 S 48.3 58.0 13.0 0.081 0.456 F:Q16552:0.019
A:None:0.444
 SO4
HOH
 3.127
2.914
 C
N
 O3
O
ASN F:36 NA:NA DO NA DO DO DO NA NA NA
5hhv 1 Q16552 98.36 5e-87 X-RAY
 2016-06-01 ASN A:27 NA:NA DO NA DO DO DO NA NA NA
ASN B:27 NA:NA DO NA DO DO DO NA NA NA
4hr9 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ASN A:26 NA:NA DO NA DO DO DO NA NA NA
ASN B:26 NA:NA DO NA DO DO DO NA NA NA
4hsa 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ASN A:26 NA:NA DO NA DO DO DO NA NA NA
ASN B:26 B:36 127.0 0.794 -36.9 -65.2 127.0 0.794 0.0
ASN D:26 NA:NA DO NA DO DO DO NA NA NA
ASN E:26 E:36 124.0 0.775 -36.9 -65.7 NA NA NA
5vb9 1 Q16552 98.31 6e-84 X-RAY
 2018-02-14 ASN A:23 NA:NA DO NA DO DO DO NA NA NA
ASN B:23 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16552-f1 1 Q16552 100.0 6e-114 ASN A:59 A:59 128.0 0.8 -43.8 113.7