Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 52053854 | . | C | A | CCDS4937.1:NM_002190.2:c.232Cgc>Agc_NP_002181.1:p.78R>S | Homo sapiens interleukin 17A (IL17A), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5n7w | 3 | Q16552 | 100.0 | 2e-113 |
X-RAY |
2018-11-14 | ARG | E:78 | X:55 | 118.0 | 0.524 | E | -85.7 | 121.9 | 118.0 | 0.524 | 0.0 |
HOH |
3.882 |
O |
O |
||
ARG | F:78 | Y:55 | 138.0 | 0.613 | E | -87.8 | 122.6 | 122.0 | 0.542 | 0.071 |
B:None:0.071 |
HOH |
5.276 |
NH2 |
O |
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6wio | 3 | Q16552 | 100.0 | 3e-113 |
X-RAY |
2020-09-23 | ARG | C:78 | C:78 | 162.0 | 0.72 | E | -82.5 | 132.9 | 162.0 | 0.72 | 0.0 | ||||||
6wir | 3 | Q16552 | 100.0 | 3e-113 |
X-RAY |
2020-09-23 | ARG | C:78 | C:55 | 168.0 | 0.747 | E | -66.3 | 147.8 | 168.0 | 0.747 | 0.0 | ||||||
2vxs | 1 | Q16552 | 100.0 | 1e-99 |
X-RAY |
2009-07-14 | ARG | A:60 | A:55 | 147.0 | 0.653 | E | -75.1 | 100.5 | NA | NA | NA | ||||||
ARG | B:60 | B:55 | 133.0 | 0.591 | E | -86.7 | 154.3 | NA | NA | NA | |||||||||||||
ARG | C:60 | C:55 | 150.0 | 0.667 | -76.0 | 141.5 | 150.0 | 0.667 | 0.0 | ||||||||||||||
ARG | D:60 | D:55 | 141.0 | 0.627 | E | -59.3 | 130.0 | 141.0 | 0.627 | 0.0 | |||||||||||||
5hhx | 1 | Q16552 | 98.55 | 2e-99 |
X-RAY |
2016-06-01 | ARG | A:61 | A:55 | 132.0 | 0.587 | E | -86.6 | 108.9 | 132.0 | 0.587 | 0.0 |
HOH |
9.818 |
C |
O |
||
ARG | B:61 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
5hi3 | 1 | Q16552 | 100.0 | 1e-96 |
X-RAY |
2016-08-31 | ARG | A:55 | A:55 | 128.0 | 0.569 | E | -81.1 | 120.1 | 128.0 | 0.569 | 0.0 |
63O |
9.798 |
CA |
C22 |
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ARG | B:55 | B:55 | 128.0 | 0.569 | E | -80.5 | 119.6 | 128.0 | 0.569 | 0.0 |
63O HOH |
9.756 7.481 |
CA CA |
C22 O |
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5hi4 | 1 | Q16552 | 100.0 | 1e-96 |
X-RAY |
2016-08-31 | ARG | A:55 | A:55 | 131.0 | 0.582 | E | -83.1 | 121.8 | 131.0 | 0.582 | 0.0 |
63P HOH |
7.580 8.698 |
CA N |
O1 O |
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ARG | B:55 | B:55 | 132.0 | 0.587 | E | -82.8 | 121.9 | 132.0 | 0.587 | 0.0 | |||||||||||||
5hi5 | 1 | Q16552 | 100.0 | 1e-96 |
X-RAY |
2016-08-31 | ARG | A:55 | A:55 | 133.0 | 0.591 | E | -82.1 | 121.8 | 133.0 | 0.591 | 0.0 | ||||||
ARG | B:55 | B:55 | 130.0 | 0.578 | E | -81.5 | 121.5 | 130.0 | 0.578 | 0.0 |
63Q |
7.465 |
CA |
O1 |
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5n92 | 1 | Q16552 | 100.0 | 1e-96 |
X-RAY |
2017-09-06 | ARG | A:55 | A:78 | 142.0 | 0.631 | E | -77.7 | 131.1 | 142.0 | 0.631 | 0.0 |
HOH |
3.095 |
N |
O |
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5nan | 1 | Q16552 | 100.0 | 1e-96 |
X-RAY |
2017-09-06 | ARG | A:55 | A:78 | 144.0 | 0.64 | E | -74.3 | 95.9 | 144.0 | 0.64 | 0.0 | ||||||
ARG | D:55 | D:78 | 142.0 | 0.631 | E | -73.6 | 95.6 | NA | NA | NA | |||||||||||||
4qhu | 3 | Q16552 | 98.48 | 2e-95 |
X-RAY |
2015-08-05 | ARG | E:55 | C:55 | 128.0 | 0.569 | E | -87.9 | 136.5 | 61.0 | 0.271 | 0.298 |
B:None:0.173 A:None:0.187 |
GOL SO4 HOH |
4.251 8.470 3.049 |
NH2 CG N |
O1 O1 O |
|
ARG | F:55 | D:55 | 133.0 | 0.591 | E | -69.8 | 120.9 | 46.0 | 0.204 | 0.387 |
C:None:0.191 D:None:0.253 |
GOL HOH |
2.362 2.413 |
NH1 NH2 |
O3 O |
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5hhv | 1 | Q16552 | 98.36 | 5e-87 |
X-RAY |
2016-06-01 | ARG | A:46 | A:55 | 136.0 | 0.604 | E | -79.6 | 122.3 | 136.0 | 0.604 | 0.0 | ||||||
ARG | B:46 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4hr9 | 1 | Q16552 | 98.36 | 6e-87 |
X-RAY |
2013-05-22 | ARG | A:45 | A:55 | 127.0 | 0.564 | E | -79.9 | 107.0 | 127.0 | 0.564 | 0.0 |
HOH |
3.180 |
N |
O |
||
ARG | B:45 | B:55 | 143.0 | 0.636 | E | -83.0 | 98.5 | 143.0 | 0.636 | 0.0 |
HOH |
4.714 |
O |
O |
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4hsa | 1 | Q16552 | 98.36 | 6e-87 |
X-RAY |
2013-05-22 | ARG | A:45 | A:55 | 142.0 | 0.631 | E | -69.9 | 126.4 | 142.0 | 0.631 | 0.0 | ||||||
ARG | B:45 | B:55 | 135.0 | 0.6 | E | -77.1 | 126.1 | 92.0 | 0.409 | 0.191 |
C:Q96F46:0.191 |
HOH |
5.121 |
NH2 |
O |
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ARG | D:45 | D:55 | 138.0 | 0.613 | E | -75.2 | 126.6 | NA | NA | NA | |||||||||||||
ARG | E:45 | E:55 | 144.0 | 0.64 | E | -77.4 | 127.1 | NA | NA | NA | |||||||||||||
5vb9 | 1 | Q16552 | 98.31 | 6e-84 |
X-RAY |
2018-02-14 | ARG | A:42 | A:55 | 121.0 | 0.538 | E | -87.1 | 140.8 | 104.0 | 0.462 | 0.076 |
C:None:0.076 |
HOH |
2.788 |
NH2 |
O |
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ARG | B:42 | B:55 | 138.0 | 0.613 | E | -87.2 | 138.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q16552-f1 | 1 | Q16552 | 100.0 | 6e-114 | ARG | A:78 | A:78 | 116.0 | 0.516 | E | -82.9 | 108.2 |