Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52053855 . G A CCDS4937.1:NM_002190.2:c.233cGc>cAc_NP_002181.1:p.78R>H Homo sapiens interleukin 17A (IL17A), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5n7w 3 Q16552 100.0 2e-113 X-RAY
 2018-11-14 ARG E:78 X:55 118.0 0.524 E -85.7 121.9 118.0 0.524 0.0 HOH
 3.882
 O
 O
ARG F:78 Y:55 138.0 0.613 E -87.8 122.6 122.0 0.542 0.071 B:None:0.071
 HOH
 5.276
 NH2
 O
6wio 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ARG C:78 C:78 162.0 0.72 E -82.5 132.9 162.0 0.72 0.0
6wir 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ARG C:78 C:55 168.0 0.747 E -66.3 147.8 168.0 0.747 0.0
2vxs 1 Q16552 100.0 1e-99 X-RAY
 2009-07-14 ARG A:60 A:55 147.0 0.653 E -75.1 100.5 NA NA NA
ARG B:60 B:55 133.0 0.591 E -86.7 154.3 NA NA NA
ARG C:60 C:55 150.0 0.667 -76.0 141.5 150.0 0.667 0.0
ARG D:60 D:55 141.0 0.627 E -59.3 130.0 141.0 0.627 0.0
5hhx 1 Q16552 98.55 2e-99 X-RAY
 2016-06-01 ARG A:61 A:55 132.0 0.587 E -86.6 108.9 132.0 0.587 0.0 HOH
 9.818
 C
 O
ARG B:61 NA:NA DO NA DO DO DO NA NA NA
5hi3 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ARG A:55 A:55 128.0 0.569 E -81.1 120.1 128.0 0.569 0.0 63O
 9.798
 CA
 C22
ARG B:55 B:55 128.0 0.569 E -80.5 119.6 128.0 0.569 0.0 63O
HOH
 9.756
7.481
 CA
CA
 C22
O
5hi4 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ARG A:55 A:55 131.0 0.582 E -83.1 121.8 131.0 0.582 0.0 63P
HOH
 7.580
8.698
 CA
N
 O1
O
ARG B:55 B:55 132.0 0.587 E -82.8 121.9 132.0 0.587 0.0
5hi5 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ARG A:55 A:55 133.0 0.591 E -82.1 121.8 133.0 0.591 0.0
ARG B:55 B:55 130.0 0.578 E -81.5 121.5 130.0 0.578 0.0 63Q
 7.465
 CA
 O1
5n92 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ARG A:55 A:78 142.0 0.631 E -77.7 131.1 142.0 0.631 0.0 HOH
 3.095
 N
 O
5nan 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ARG A:55 A:78 144.0 0.64 E -74.3 95.9 144.0 0.64 0.0
ARG D:55 D:78 142.0 0.631 E -73.6 95.6 NA NA NA
4qhu 3 Q16552 98.48 2e-95 X-RAY
 2015-08-05 ARG E:55 C:55 128.0 0.569 E -87.9 136.5 61.0 0.271 0.298 B:None:0.173
A:None:0.187
 GOL
SO4
HOH
 4.251
8.470
3.049
 NH2
CG
N
 O1
O1
O
ARG F:55 D:55 133.0 0.591 E -69.8 120.9 46.0 0.204 0.387 C:None:0.191
D:None:0.253
 GOL
HOH
 2.362
2.413
 NH1
NH2
 O3
O
5hhv 1 Q16552 98.36 5e-87 X-RAY
 2016-06-01 ARG A:46 A:55 136.0 0.604 E -79.6 122.3 136.0 0.604 0.0
ARG B:46 NA:NA DO NA DO DO DO NA NA NA
4hr9 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ARG A:45 A:55 127.0 0.564 E -79.9 107.0 127.0 0.564 0.0 HOH
 3.180
 N
 O
ARG B:45 B:55 143.0 0.636 E -83.0 98.5 143.0 0.636 0.0 HOH
 4.714
 O
 O
4hsa 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ARG A:45 A:55 142.0 0.631 E -69.9 126.4 142.0 0.631 0.0
ARG B:45 B:55 135.0 0.6 E -77.1 126.1 92.0 0.409 0.191 C:Q96F46:0.191
 HOH
 5.121
 NH2
 O
ARG D:45 D:55 138.0 0.613 E -75.2 126.6 NA NA NA
ARG E:45 E:55 144.0 0.64 E -77.4 127.1 NA NA NA
5vb9 1 Q16552 98.31 6e-84 X-RAY
 2018-02-14 ARG A:42 A:55 121.0 0.538 E -87.1 140.8 104.0 0.462 0.076 C:None:0.076
 HOH
 2.788
 NH2
 O
ARG B:42 B:55 138.0 0.613 E -87.2 138.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16552-f1 1 Q16552 100.0 6e-114 ARG A:78 A:78 116.0 0.516 E -82.9 108.2