Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52053926 . G A CCDS4937.1:NM_002190.2:c.304Gct>Act_NP_002181.1:p.102A>T Homo sapiens interleukin 17A (IL17A), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5n7w 3 Q16552 100.0 2e-113 X-RAY
 2018-11-14 ALA E:102 X:79 110.0 0.957 T -64.3 -28.4 92.0 0.8 0.157 F:Q16552:0.157
 HOH
 7.109
 N
 O
ALA F:102 Y:79 111.0 0.965 T -64.3 -28.1 93.0 0.809 0.156 E:Q16552:0.157
 HOH
 6.372
 CB
 O
6wio 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ALA C:102 C:102 109.0 0.948 T -56.0 -31.3 20.0 0.174 0.774 B:None:0.426
C:Q16552:0.574
 HOH
 5.623
 O
 O
6wir 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 ALA C:102 C:79 108.0 0.939 T -58.8 -31.0 23.0 0.2 0.739 B:None:0.452
C:Q16552:0.513
2vxs 1 Q16552 100.0 1e-99 X-RAY
 2009-07-14 ALA A:84 A:79 112.0 0.974 T -30.9 -59.1 NA NA NA
ALA B:84 B:79 116.0 1.0 T -54.5 -29.1 NA NA NA
ALA C:84 C:79 110.0 0.957 T -53.1 -3.1 44.0 0.383 0.574 D:Q16552:0.461
K:None:0.209
ALA D:84 D:79 110.0 0.957 T -55.3 -30.4 49.0 0.426 0.531 C:Q16552:0.435
L:None:0.226
 HOH
 8.542
 O
 O
5hhx 1 Q16552 98.55 2e-99 X-RAY
 2016-06-01 ALA A:85 A:79 105.0 0.913 S -70.3 -53.6 68.0 0.591 0.322 E:None:0.113
A:Q16552:0.235
ALA B:85 NA:NA DO NA DO DO DO NA NA NA
5hi3 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ALA A:79 A:79 107.0 0.93 T -55.0 -27.7 87.0 0.757 0.173 G:None:0.009
B:Q16552:0.165
 HOH
 6.850
 O
 O
ALA B:79 B:79 106.0 0.922 T -54.4 -28.6 85.0 0.739 0.183 A:Q16552:0.148
D:None:0.035
 HOH
 7.929
 N
 O
5hi4 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ALA A:79 A:79 104.0 0.904 T -56.9 -33.9 84.0 0.73 0.174 B:Q16552:0.157
D:None:0.017
 HOH
 5.602
 N
 O
ALA B:79 B:79 106.0 0.922 T -58.1 -32.9 85.0 0.739 0.183 A:Q16552:0.183
 HOH
 4.568
 O
 O
5hi5 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 ALA A:79 A:79 106.0 0.922 T -57.9 -27.9 98.0 0.852 0.07 B:Q16552:0.07
 HOH
 4.511
 O
 O
ALA B:79 B:79 108.0 0.939 T -57.1 -28.7 82.0 0.713 0.226 A:Q16552:0.2
D:None:0.026
 HOH
 5.533
 N
 O
5n92 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ALA A:79 A:102 110.0 0.957 T -57.6 -30.6 110.0 0.957 0.0 HOH
 3.041
 O
 O
5nan 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 ALA A:79 A:102 112.0 0.974 T -40.7 -22.7 112.0 0.974 0.0
ALA D:79 D:102 111.0 0.965 T -41.0 -24.2 NA NA NA
4qhu 3 Q16552 98.48 2e-95 X-RAY
 2015-08-05 ALA E:79 C:79 108.0 0.939 T -67.6 -22.6 104.0 0.904 0.035 F:Q16552:0.035
 HOH
 2.792
 N
 O
ALA F:79 D:79 106.0 0.922 T -59.9 -26.0 83.0 0.722 0.2 E:Q16552:0.2
 HOH
 3.164
 O
 O
5hhv 1 Q16552 98.36 5e-87 X-RAY
 2016-06-01 ALA A:70 A:79 107.0 0.93 T -55.6 -12.9 87.0 0.757 0.173 E:None:0.043
A:Q16552:0.13
 HOH
 6.608
 N
 O
ALA B:70 NA:NA DO NA DO DO DO NA NA NA
4hr9 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ALA A:69 A:79 111.0 0.965 T -73.3 -23.3 96.0 0.835 0.13 B:Q16552:0.13
 HOH
 5.897
 N
 O
ALA B:69 B:79 110.0 0.957 T -69.4 -21.7 97.0 0.843 0.114 A:Q16552:0.113
 HOH
 3.010
 N
 O
4hsa 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 ALA A:69 A:79 107.0 0.93 T -51.7 -40.5 107.0 0.93 0.0
ALA B:69 B:79 104.0 0.904 T -63.8 -46.7 99.0 0.861 0.043 A:Q16552:0.043
ALA D:69 D:79 108.0 0.939 T -54.5 -39.8 NA NA NA
ALA E:69 E:79 109.0 0.948 T -45.6 -38.9 NA NA NA
5vb9 1 Q16552 98.31 6e-84 X-RAY
 2018-02-14 ALA A:66 A:79 111.0 0.965 T -57.7 -24.9 111.0 0.965 0.0 EDO
EDO
HOH
 5.815
6.942
2.805
 N
N
N
 C2
O1
O
ALA B:66 B:79 112.0 0.974 T -57.4 -25.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16552-f1 1 Q16552 100.0 6e-114 ALA A:102 A:102 108.0 0.939 T -62.3 -25.3