Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52053938 . G A CCDS4937.1:NM_002190.2:c.316Gtg>Atg_NP_002181.1:p.106V>M Homo sapiens interleukin 17A (IL17A), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5n7w 3 Q16552 100.0 2e-113 X-RAY
 2018-11-14 VAL E:106 X:83 49.0 0.316 E -86.5 99.4 49.0 0.316 0.0 HOH
 7.283
 C
 O
VAL F:106 Y:83 47.0 0.303 E -86.8 99.1 47.0 0.303 0.0 HOH
 7.359
 CG2
 O
6wio 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 VAL C:106 C:106 50.0 0.323 E -79.7 122.5 3.0 0.019 0.304 C:Q16552:0.206
A:None:0.103
 HOH
 4.280
 O
 O
6wir 3 Q16552 100.0 3e-113 X-RAY
 2020-09-23 VAL C:106 C:83 45.0 0.29 E -87.3 123.9 37.0 0.239 0.051 A:None:0.052
 HOH
 4.916
 CG2
 O
2vxs 1 Q16552 100.0 1e-99 X-RAY
 2009-07-14 VAL A:88 A:83 51.0 0.329 E -77.2 134.5 NA NA NA
VAL B:88 B:83 44.0 0.284 E -73.0 131.4 NA NA NA
VAL C:88 C:83 50.0 0.323 E -75.5 116.2 50.0 0.323 0.0 SO4
SO4
HOH
 3.226
7.756
3.927
 CG1
O
O
 O1
O4
O
VAL D:88 D:83 50.0 0.323 E -69.5 124.0 50.0 0.323 0.0 SO4
HOH
 3.172
4.356
 CG1
CG2
 O4
O
5hhx 1 Q16552 98.55 2e-99 X-RAY
 2016-06-01 VAL A:89 A:83 47.0 0.303 E -78.8 126.5 47.0 0.303 0.0
VAL B:89 NA:NA DO NA DO DO DO NA NA NA
5hi3 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 VAL A:83 A:83 48.0 0.31 E -71.6 120.0 48.0 0.31 0.0 HOH
 7.147
 CG1
 O
VAL B:83 B:83 48.0 0.31 E -70.9 120.1 30.0 0.194 0.116 A:Q16552:0.116
 HOH
 3.858
 CG1
 O
5hi4 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 VAL A:83 A:83 46.0 0.297 E -67.7 118.6 46.0 0.297 0.0 HOH
 3.855
 O
 O
VAL B:83 B:83 44.0 0.284 E -68.3 118.8 44.0 0.284 0.0 HOH
 3.829
 CG1
 O
5hi5 1 Q16552 100.0 1e-96 X-RAY
 2016-08-31 VAL A:83 A:83 44.0 0.284 E -70.5 120.8 44.0 0.284 0.0 HOH
 3.924
 CG1
 O
VAL B:83 B:83 46.0 0.297 E -69.8 120.3 46.0 0.297 0.0 HOH
 3.900
 CG1
 O
5n92 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 VAL A:83 A:106 46.0 0.297 E -79.4 119.7 46.0 0.297 0.0 HOH
 4.096
 O
 O
5nan 1 Q16552 100.0 1e-96 X-RAY
 2017-09-06 VAL A:83 A:106 33.0 0.213 E -84.5 127.5 33.0 0.213 0.0
VAL D:83 D:106 33.0 0.213 E -83.8 128.0 NA NA NA
4qhu 3 Q16552 98.48 2e-95 X-RAY
 2015-08-05 VAL E:83 C:83 49.0 0.316 E -76.0 130.9 49.0 0.316 0.0 SO4
HOH
 3.321
2.519
 CG2
O
 O2
O
VAL F:83 D:83 54.0 0.348 E -66.5 128.4 54.0 0.348 0.0 SO4
HOH
 3.605
2.886
 CG1
O
 O4
O
5hhv 1 Q16552 98.36 5e-87 X-RAY
 2016-06-01 VAL A:74 A:83 47.0 0.303 E -72.1 116.3 47.0 0.303 0.0 HOH
 4.750
 CG1
 O
VAL B:74 NA:NA DO NA DO DO DO NA NA NA
4hr9 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 VAL A:73 A:83 38.0 0.245 E -82.2 121.8 38.0 0.245 0.0 HOH
 3.888
 O
 O
VAL B:73 B:83 76.0 0.49 E -74.5 128.8 76.0 0.49 0.0 HOH
 3.439
 CG1
 O
4hsa 1 Q16552 98.36 6e-87 X-RAY
 2013-05-22 VAL A:73 A:83 45.0 0.29 E -77.0 119.1 45.0 0.29 0.0
VAL B:73 B:83 40.0 0.258 E -84.4 127.0 40.0 0.258 0.0
VAL D:73 D:83 44.0 0.284 E -72.5 123.5 NA NA NA
VAL E:73 E:83 41.0 0.265 E -74.9 125.5 NA NA NA
5vb9 1 Q16552 98.31 6e-84 X-RAY
 2018-02-14 VAL A:70 A:83 38.0 0.245 E -77.4 124.7 38.0 0.245 0.0 EDO
HOH
 6.556
2.847
 C
O
 C2
O
VAL B:70 B:83 40.0 0.258 E -77.2 123.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16552-f1 1 Q16552 100.0 6e-114 VAL A:106 A:106 44.0 0.284 E -74.4 112.2