Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52697721 . A C CCDS4946.1:NM_153699.1:c.482gTg>gGg_NP_714543.1:p.161V>G Homo sapiens glutathione S-transferase alpha 5 (GSTA5), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1pkw 1 P08263 90.09 1e-145 X-RAY
2004-06-22 VAL A:161 A:161 0.0 0.0 H -61.7 -43.4 0.0 0.0 0.0 HED
HOH
8.856
6.279
N
N
C5
O
VAL B:161 B:161 0.0 0.0 H -62.7 -45.0 0.0 0.0 0.0 HED
HOH
8.736
6.298
N
N
C2
O
1pkz 1 P08263 90.09 1e-145 X-RAY
2004-06-22 VAL A:161 A:161 0.0 0.0 H -64.3 -34.5 0.0 0.0 0.0 HED
HOH
8.837
6.425
N
N
C5
O
VAL B:161 B:161 0.0 0.0 H -62.0 -44.9 0.0 0.0 0.0 HED
HOH
8.663
6.381
N
N
S3
O
1pl1 1 P08263 90.09 1e-145 X-RAY
2004-06-22 VAL A:161 A:161 0.0 0.0 H -64.0 -40.8 0.0 0.0 0.0 HOH
6.346
N
O
VAL B:161 B:161 0.0 0.0 H -66.8 -35.0 0.0 0.0 0.0 HOH
6.333
N
O
6yaw 1 P08263 90.09 1e-145 X-RAY
2020-08-26 VAL A:161 A:161 0.0 0.0 H -66.6 -37.2 0.0 0.0 0.0 HOH
6.245
N
O
VAL B:161 B:161 0.0 0.0 H -63.5 -41.1 0.0 0.0 0.0 HOH
6.214
C
O
2r6k 1 P08263 89.64 2e-145 X-RAY
2008-08-19 VAL A:161 A:161 0.0 0.0 H -57.3 -50.3 0.0 0.0 0.0 HOH
7.210
C
O
VAL B:161 B:161 0.0 0.0 H -56.3 -44.7 0.0 0.0 0.0 HOH
6.948
O
O
2r3x 1 P08263 90.09 3e-145 X-RAY
2007-12-18 VAL A:161 A:161 0.0 0.0 H -59.1 -44.5 0.0 0.0 0.0 HOH
6.477
N
O
VAL B:161 B:161 0.0 0.0 H -65.0 -41.7 0.0 0.0 0.0 HOH
6.341
N
O
3zfl 1 P08263 89.64 4e-145 X-RAY
2012-12-19 VAL A:161 A:161 0.0 0.0 H -66.0 -34.4 0.0 0.0 0.0 HOH
6.123
C
O
VAL B:161 B:161 0.0 0.0 H -63.2 -41.2 0.0 0.0 0.0 HOH
6.411
C
O
1gse 1 P08263 90.05 7e-145 X-RAY
1995-09-15 VAL A:160 A:161 0.0 0.0 H -63.5 -39.1 0.0 0.0 0.0 BME
HOH
9.083
6.487
N
C
S2
O
VAL B:160 B:161 0.0 0.0 H -61.8 -39.5 0.0 0.0 0.0 BME
HOH
9.041
6.340
N
C
C2
O
1gsd 1 P08263 90.05 8e-145 X-RAY
1995-09-15 VAL A:160 A:161 0.0 0.0 H -60.6 -40.2 0.0 0.0 0.0 HOH
6.269
C
O
VAL B:160 B:161 0.0 0.0 H -60.6 -40.2 0.0 0.0 0.0 HOH
6.270
C
O
VAL C:160 C:161 0.0 0.0 H -60.5 -40.2 NA NA NA
VAL D:160 D:161 0.0 0.0 H -60.6 -40.2 NA NA NA
1gsf 1 P08263 90.05 8e-145 X-RAY
1995-09-15 VAL A:160 A:161 0.0 0.0 H -58.3 -42.1 0.0 0.0 0.0 HOH
6.123
C
O
VAL B:160 B:161 0.0 0.0 H -58.3 -42.1 0.0 0.0 0.0 HOH
6.123
C
O
VAL C:160 C:161 0.0 0.0 H -58.3 -42.1 NA NA NA
VAL D:160 D:161 0.0 0.0 H -58.4 -42.1 NA NA NA
1guh 1 P08263 90.05 8e-145 X-RAY
1993-10-31 VAL A:160 A:161 0.0 0.0 H -63.5 -40.7 0.0 0.0 0.0
VAL B:160 B:161 0.0 0.0 H -63.5 -40.7 0.0 0.0 0.0
VAL C:160 C:161 0.0 0.0 H -63.5 -40.7 NA NA NA
VAL D:160 D:161 0.0 0.0 H -63.5 -40.7 NA NA NA
1k3l 1 P08263 90.05 8e-145 X-RAY
2002-10-23 VAL A:160 A:161 0.0 0.0 H -64.3 -37.5 0.0 0.0 0.0 HOH
6.268
N
O
VAL B:160 B:161 0.0 0.0 H -68.1 -38.7 0.0 0.0 0.0 HOH
6.237
N
O
1k3o 1 P08263 90.05 8e-145 X-RAY
2002-10-30 VAL A:160 A:161 0.0 0.0 H -66.6 -42.5 0.0 0.0 0.0 HOH
6.249
C
O
VAL B:160 B:161 0.0 0.0 H -62.0 -42.0 0.0 0.0 0.0 HOH
6.364
C
O
1k3y 1 P08263 90.05 8e-145 X-RAY
2002-10-30 VAL A:160 A:161 0.0 0.0 H -65.6 -36.0 0.0 0.0 0.0 GOL
HOH
9.568
6.352
N
N
O1
O
VAL B:160 B:161 0.0 0.0 H -67.0 -36.0 0.0 0.0 0.0 HOH
6.259
N
O
6ato 1 P08263 90.05 8e-145 X-RAY
2018-09-12 VAL A:160 A:161 0.0 0.0 H -67.1 -37.9 0.0 0.0 0.0 HOH
6.248
N
O
VAL B:160 B:161 0.0 0.0 H -68.1 -39.3 NA NA NA
6atp 1 P08263 90.05 8e-145 X-RAY
2018-09-12 VAL A:160 A:161 0.0 0.0 H -64.1 -38.1 0.0 0.0 0.0 HOH
6.261
N
O
VAL B:160 B:161 0.0 0.0 H -65.7 -36.8 NA NA NA
6atq 1 P08263 90.05 8e-145 X-RAY
2018-09-12 VAL A:160 A:161 0.0 0.0 H -70.2 -32.8 0.0 0.0 0.0 HOH
6.251
N
O
VAL B:160 B:161 0.0 0.0 H -67.0 -40.1 NA NA NA
6atr 1 P08263 90.05 8e-145 X-RAY
2018-09-12 VAL A:160 A:161 0.0 0.0 H -65.5 -37.7 0.0 0.0 0.0 EDO
EDO
EDO
HOH
9.933
8.325
9.246
6.336
O
N
O
N
H12
HO1
H11
O
VAL B:160 B:161 0.0 0.0 H -66.6 -38.0 NA NA NA
3zfb 1 P08263 89.64 8e-145 X-RAY
2012-12-19 VAL A:161 A:161 0.0 0.0 H -68.8 -35.7 0.0 0.0 0.0 HOH
6.283
N
O
VAL B:161 B:161 0.0 0.0 H -56.8 -45.6 0.0 0.0 0.0 HOH
6.336
C
O
1ydk 1 P08263 89.64 8e-145 X-RAY
2005-06-07 VAL A:161 A:161 0.0 0.0 H -65.1 -38.7 0.0 0.0 0.0 HOH
6.214
N
O
VAL B:161 B:161 0.0 0.0 H -63.7 -40.5 0.0 0.0 0.0 HOH
6.383
N
O
3u6v 1 P08263 89.64 8e-145 X-RAY
2011-10-26 VAL A:161 A:161 0.0 0.0 H -59.7 -43.3 0.0 0.0 0.0 HOH
6.137
C
O
VAL B:161 B:161 0.0 0.0 H -62.5 -43.3 0.0 0.0 0.0 HOH
6.542
C
O
1pl2 1 P08263 89.64 2e-144 X-RAY
2004-06-22 VAL A:161 A:161 0.0 0.0 H -65.8 -39.3 0.0 0.0 0.0 HOH
6.187
N
O
VAL B:161 B:161 0.0 0.0 H -68.2 -35.4 0.0 0.0 0.0 HOH
6.228
N
O
3l0h 1 P08263 89.64 3e-144 X-RAY
2010-01-12 VAL A:161 A:161 4.0 0.026 H -68.0 -43.2 4.0 0.026 0.0 HOH
6.526
N
O
VAL B:161 B:161 4.0 0.026 H -68.6 -43.6 4.0 0.026 0.0 HOH
6.819
N
O
3q74 1 P08263 89.59 6e-144 X-RAY
2011-01-12 VAL A:160 A:161 0.0 0.0 H -63.7 -41.6 0.0 0.0 0.0 HOH
6.445
N
O
VAL B:160 B:161 0.0 0.0 H -70.8 -40.3 0.0 0.0 0.0 HOH
6.208
N
O
3ktl 1 P08263 89.59 6e-144 X-RAY
2009-12-22 VAL A:160 A:161 0.0 0.0 H -69.1 -33.7 0.0 0.0 0.0 HOH
6.444
N
O
VAL B:160 B:161 0.0 0.0 H -62.4 -45.5 0.0 0.0 0.0 HOH
6.336
N
O
1usb 1 P08263 89.59 7e-144 X-RAY
2004-09-01 VAL A:164 A:161 0.0 0.0 H -67.6 -37.9 0.0 0.0 0.0 CL
HOH
9.354
7.383
N
C
CL
O
VAL B:164 B:161 0.0 0.0 H -61.0 -38.5 0.0 0.0 0.0 CL
HOH
9.381
6.834
N
CG2
CL
O
1xwg 1 P08263 89.59 8e-144 X-RAY
2005-11-01 VAL A:160 A:161 0.0 0.0 H -63.4 -38.1 0.0 0.0 0.0 HOH
6.396
N
O
VAL B:160 B:161 0.0 0.0 H -65.4 -38.1 0.0 0.0 0.0 HOH
6.208
N
O
2vct 1 P09210 88.74 3e-143 X-RAY
2008-10-28 VAL A:161 A:161 0.0 0.0 H -69.7 -45.0 0.0 0.0 0.0 HOH
6.227
N
O
VAL B:161 B:161 0.0 0.0 H -63.7 -43.3 0.0 0.0 0.0 HOH
6.276
C
O
VAL C:161 C:161 0.0 0.0 H -67.5 -40.6 NA NA NA
VAL D:161 D:161 0.0 0.0 H -61.2 -40.5 NA NA NA
VAL E:161 E:161 0.0 0.0 H -50.5 -39.3 NA NA NA
VAL F:161 F:161 0.0 0.0 H -68.1 -41.6 NA NA NA
VAL G:161 G:161 0.0 0.0 H -62.1 -33.6 NA NA NA
VAL H:161 H:161 0.0 0.0 H -67.0 -40.9 NA NA NA
2wju 1 P09210 88.74 3e-143 X-RAY
2009-06-09 VAL A:161 A:161 0.0 0.0 H -65.5 -37.2 0.0 0.0 0.0 HOH
7.011
O
O
VAL B:161 B:161 0.0 0.0 H -62.9 -39.0 0.0 0.0 0.0 HOH
6.883
O
O
VAL C:161 C:161 0.0 0.0 H -68.7 -39.5 NA NA NA
VAL D:161 D:161 0.0 0.0 H -64.6 -33.4 NA NA NA
VAL E:161 E:161 0.0 0.0 H -66.3 -35.4 NA NA NA
VAL F:161 F:161 0.0 0.0 H -65.0 -38.7 NA NA NA
VAL G:161 G:161 0.0 0.0 H -75.1 -33.1 NA NA NA
VAL H:161 H:161 0.0 0.0 H -71.3 -34.7 NA NA NA
5jcu 1 P08263 89.59 5e-143 X-RAY
2016-10-12 VAL A:160 A:161 0.0 0.0 H -67.9 -36.6 0.0 0.0 0.0 EDO
HOH
9.392
6.251
N
N
O2
O
VAL B:160 B:161 0.0 0.0 H -68.0 -38.2 0.0 0.0 0.0 HOH
6.288
N
O
VAL C:160 C:161 0.0 0.0 H -66.9 -38.8 NA NA NA
VAL D:160 D:161 0.0 0.0 H -64.8 -37.3 NA NA NA
4hj2 1 P08263 89.86 1e-141 X-RAY
2013-03-27 VAL A:158 A:161 0.0 0.0 H -61.3 -36.4 0.0 0.0 0.0 HOH
6.347
C
O
VAL B:158 B:161 0.0 0.0 H -58.7 -40.9 0.0 0.0 0.0 HOH
6.321
N
O
4acs 1 P09210 87.78 2e-140 X-RAY
2011-12-28 VAL A:161 A:161 0.0 0.0 H -70.1 -42.3 0.0 0.0 0.0 HOH
6.264
N
O
VAL B:161 B:161 0.0 0.0 H -66.6 -38.2 0.0 0.0 0.0 HOH
6.275
N
O
VAL C:161 C:161 0.0 0.0 H -71.6 -40.0 NA NA NA
VAL D:161 D:161 0.0 0.0 H -66.9 -34.6 NA NA NA
1tdi 1 Q16772 85.59 2e-138 X-RAY
2005-01-18 VAL A:161 A:161 0.0 0.0 H -62.2 -43.1 0.0 0.0 0.0 HOH
5.984
C
O
VAL B:161 B:161 0.0 0.0 H -59.9 -38.2 0.0 0.0 0.0 HOH
6.954
N
O
2vcv 1 Q16772 85.59 2e-138 X-RAY
2008-10-28 VAL A:161 A:161 0.0 0.0 H -69.3 -43.0 0.0 0.0 0.0 HOH
5.909
C
O
VAL B:161 B:161 0.0 0.0 H -69.9 -41.2 0.0 0.0 0.0 HOH
5.942
C
O
VAL C:161 C:161 0.0 0.0 H -67.2 -45.3 NA NA NA
VAL D:161 D:161 0.0 0.0 H -63.6 -40.4 NA NA NA
VAL E:161 E:161 0.0 0.0 H -66.6 -41.5 NA NA NA
VAL F:161 F:161 0.0 0.0 H -63.8 -46.3 NA NA NA
VAL G:161 G:161 0.0 0.0 H -69.4 -40.0 NA NA NA
VAL H:161 H:161 0.0 0.0 H -61.7 -42.5 NA NA NA
VAL I:161 I:161 0.0 0.0 H -68.7 -40.0 NA NA NA
VAL J:161 J:161 0.0 0.0 H -63.5 -43.9 NA NA NA
VAL K:161 K:161 0.0 0.0 H -70.1 -39.3 NA NA NA
VAL L:161 L:161 0.0 0.0 H -67.8 -39.2 NA NA NA
VAL M:161 M:161 0.0 0.0 H -68.0 -41.3 NA NA NA
VAL N:161 N:161 0.0 0.0 H -64.6 -41.5 NA NA NA
VAL O:161 O:161 0.0 0.0 H -64.6 -47.5 NA NA NA
VAL P:161 P:161 0.0 0.0 H -65.1 -39.2 NA NA NA
3i69 1 P08263 84.62 5e-135 X-RAY
2009-09-01 VAL A:161 A:161 0.0 0.0 H -63.8 -44.1 0.0 0.0 0.0 HOH
6.223
C
O
VAL B:161 B:161 0.0 0.0 H -72.3 -28.9 0.0 0.0 0.0 HOH
6.198
N
O
VAL C:161 C:161 0.0 0.0 H -66.8 -35.5 NA NA NA
VAL D:161 D:161 0.0 0.0 H -58.0 -37.0 NA NA NA
VAL E:161 E:161 0.0 0.0 H -57.8 -50.0 NA NA NA
VAL F:161 F:161 0.0 0.0 H -56.1 -30.7 NA NA NA
VAL G:161 G:161 0.0 0.0 H -62.5 -30.8 NA NA NA
VAL H:161 H:161 0.0 0.0 H -67.6 -36.8 NA NA NA
3i6a 1 P08263 84.62 5e-135 X-RAY
2009-09-01 VAL A:161 A:161 0.0 0.0 H -61.9 -41.0 0.0 0.0 0.0 HOH
6.165
N
O
VAL B:161 B:161 0.0 0.0 H -66.1 -36.0 0.0 0.0 0.0 HOH
5.715
O
O
VAL C:161 C:161 0.0 0.0 H -67.2 -38.3 NA NA NA
VAL D:161 D:161 0.0 0.0 H -61.5 -37.3 NA NA NA
VAL E:161 E:161 0.0 0.0 H -57.8 -44.5 NA NA NA
VAL F:161 F:161 0.0 0.0 H -64.1 -36.9 NA NA NA
VAL G:161 G:161 0.0 0.0 H -72.0 -32.1 NA NA NA
VAL H:161 H:161 0.0 0.0 H -68.9 -43.6 NA NA NA
3ik9 1 P08263 84.62 5e-135 X-RAY
2010-06-23 VAL A:161 A:161 0.0 0.0 H -65.9 -43.5 0.0 0.0 0.0 HOH
7.157
N
O
VAL B:161 B:161 0.0 0.0 H -70.2 -34.8 0.0 0.0 0.0 HOH
6.087
C
O
VAL C:161 C:161 0.0 0.0 H -72.1 -45.4 NA NA NA
VAL D:161 D:161 0.0 0.0 H -60.1 -39.3 NA NA NA
VAL E:161 E:161 0.0 0.0 H -59.7 -47.0 NA NA NA
VAL F:161 F:161 0.0 0.0 H -71.3 -36.3 NA NA NA
VAL G:161 G:161 0.0 0.0 H -68.1 -39.6 NA NA NA
VAL H:161 H:161 0.0 0.0 H -62.5 -45.0 NA NA NA
5lcz 1 P08263,P04903 81.08 3e-128 X-RAY
2016-09-21 LEU A:161 A:161 0.0 0.0 H -51.2 -45.5 0.0 0.0 0.0 HOH
4.403
CD1
O
LEU B:161 B:161 0.0 0.0 H -55.4 -52.9 0.0 0.0 0.0 HOH
4.170
CD1
O
5ld0 1 P08263,P04903 81.08 3e-128 X-RAY
2016-09-21 LEU A:161 A:161 0.0 0.0 H -57.7 -46.2 0.0 0.0 0.0 HOH
4.945
CD1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q7rtv2-f1 1 Q7RTV2 100.0 1e-164 VAL A:161 A:161 0.0 0.0 H -69.0 -40.2
af-p08263-f1 1 P08263 90.09 6e-146 VAL A:161 A:161 0.0 0.0 H -65.3 -40.7
af-p09210-f1 1 P09210 88.74 1e-143 VAL A:161 A:161 0.0 0.0 H -67.8 -38.0
af-q16772-f1 1 Q16772 85.59 7e-139 VAL A:161 A:161 0.0 0.0 H -65.3 -39.8