Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 52843291 . C A CCDS4948.1:NM_001512.3:c.646Gtc>Ttc_NP_001503.1:p.216V>F Homo sapiens glutathione S-transferase alpha 4 (GSTA4), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1gul 1 O15217 100.0 2e-164 X-RAY
1999-01-27 VAL A:216 A:216 11.0 0.071 H -63.0 -42.7 6.0 0.039 0.032 B:None:0.032
HOH
7.973
CG1
O
VAL C:216 B:216 11.0 0.071 H -63.0 -42.7 5.0 0.032 0.039 D:None:0.039
HOH
7.973
CG1
O
VAL E:216 C:216 10.0 0.065 H -63.0 -42.8 NA NA NA
VAL G:216 D:216 10.0 0.065 H -62.9 -42.8 NA NA NA
VAL I:216 E:216 12.0 0.077 H -63.0 -42.8 NA NA NA
VAL K:216 F:216 12.0 0.077 H -63.0 -42.7 NA NA NA
VAL M:216 G:216 11.0 0.071 H -63.0 -42.7 NA NA NA
VAL O:216 H:216 11.0 0.071 H -63.0 -42.8 NA NA NA
1gum 1 O15217 100.0 2e-164 X-RAY
1999-01-27 VAL A:216 A:216 19.0 0.123 H -65.5 -43.2 19.0 0.123 0.0 HOH
8.116
CG2
O
VAL B:216 B:216 21.0 0.135 H -65.5 -43.2 21.0 0.135 0.0 HOH
8.116
CG2
O
VAL C:216 C:216 19.0 0.123 H -65.5 -43.2 NA NA NA
VAL D:216 D:216 20.0 0.129 H -65.5 -43.2 NA NA NA
VAL E:216 E:216 21.0 0.135 H -65.5 -43.2 NA NA NA
VAL F:216 F:216 20.0 0.129 H -65.5 -43.2 NA NA NA
VAL G:216 G:216 20.0 0.129 H -65.5 -43.2 NA NA NA
VAL H:216 H:216 20.0 0.129 H -65.5 -43.2 NA NA NA
3ik7 1 O15217 100.0 2e-164 X-RAY
2010-06-23 VAL A:216 A:216 17.0 0.11 H -71.6 -39.7 17.0 0.11 0.0 BOB
HOH
4.026
6.515
CG2
CG1
C45
O
VAL B:216 B:216 12.0 0.077 H -66.9 -40.6 12.0 0.077 0.0 BOB
HOH
3.993
6.491
CG2
CG1
C45
O
VAL C:216 C:216 8.0 0.052 H -67.3 -28.9 NA NA NA
VAL D:216 D:216 13.0 0.084 H -80.0 -34.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15217-f1 1 O15217 100.0 8e-165 VAL A:216 A:216 20.0 0.129 H -60.3 -43.3