Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 52843291 | . | C | A | CCDS4948.1:NM_001512.3:c.646Gtc>Ttc_NP_001503.1:p.216V>F | Homo sapiens glutathione S-transferase alpha 4 (GSTA4), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1gul | 1 | O15217 | 100.0 | 2e-164 |
X-RAY |
1999-01-27 | VAL | A:216 | A:216 | 11.0 | 0.071 | H | -63.0 | -42.7 | 6.0 | 0.039 | 0.032 |
B:None:0.032 |
HOH |
7.973 |
CG1 |
O |
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VAL | C:216 | B:216 | 11.0 | 0.071 | H | -63.0 | -42.7 | 5.0 | 0.032 | 0.039 |
D:None:0.039 |
HOH |
7.973 |
CG1 |
O |
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VAL | E:216 | C:216 | 10.0 | 0.065 | H | -63.0 | -42.8 | NA | NA | NA | |||||||||||||
VAL | G:216 | D:216 | 10.0 | 0.065 | H | -62.9 | -42.8 | NA | NA | NA | |||||||||||||
VAL | I:216 | E:216 | 12.0 | 0.077 | H | -63.0 | -42.8 | NA | NA | NA | |||||||||||||
VAL | K:216 | F:216 | 12.0 | 0.077 | H | -63.0 | -42.7 | NA | NA | NA | |||||||||||||
VAL | M:216 | G:216 | 11.0 | 0.071 | H | -63.0 | -42.7 | NA | NA | NA | |||||||||||||
VAL | O:216 | H:216 | 11.0 | 0.071 | H | -63.0 | -42.8 | NA | NA | NA | |||||||||||||
1gum | 1 | O15217 | 100.0 | 2e-164 |
X-RAY |
1999-01-27 | VAL | A:216 | A:216 | 19.0 | 0.123 | H | -65.5 | -43.2 | 19.0 | 0.123 | 0.0 |
HOH |
8.116 |
CG2 |
O |
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VAL | B:216 | B:216 | 21.0 | 0.135 | H | -65.5 | -43.2 | 21.0 | 0.135 | 0.0 |
HOH |
8.116 |
CG2 |
O |
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VAL | C:216 | C:216 | 19.0 | 0.123 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
VAL | D:216 | D:216 | 20.0 | 0.129 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
VAL | E:216 | E:216 | 21.0 | 0.135 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
VAL | F:216 | F:216 | 20.0 | 0.129 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
VAL | G:216 | G:216 | 20.0 | 0.129 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
VAL | H:216 | H:216 | 20.0 | 0.129 | H | -65.5 | -43.2 | NA | NA | NA | |||||||||||||
3ik7 | 1 | O15217 | 100.0 | 2e-164 |
X-RAY |
2010-06-23 | VAL | A:216 | A:216 | 17.0 | 0.11 | H | -71.6 | -39.7 | 17.0 | 0.11 | 0.0 |
BOB HOH |
4.026 6.515 |
CG2 CG1 |
C45 O |
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VAL | B:216 | B:216 | 12.0 | 0.077 | H | -66.9 | -40.6 | 12.0 | 0.077 | 0.0 |
BOB HOH |
3.993 6.491 |
CG2 CG1 |
C45 O |
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VAL | C:216 | C:216 | 8.0 | 0.052 | H | -67.3 | -28.9 | NA | NA | NA | |||||||||||||
VAL | D:216 | D:216 | 13.0 | 0.084 | H | -80.0 | -34.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o15217-f1 | 1 | O15217 | 100.0 | 8e-165 | VAL | A:216 | A:216 | 20.0 | 0.129 | H | -60.3 | -43.3 |