Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 116544311 | . | C | A | CCDS5768.1:NM_006136.2:c.300caC>caA_NP_006127.1:p.100H>Q | Homo sapiens capping actin protein of muscle Z-line alpha subunit 2 (CAPZA2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5nw4 | 13 | A0PFK5 | 87.06 | 0.0 |
EM |
2017-08-02 | HIS | U:100 | Y:100 | 39.0 | 0.2 | S | -92.3 | -30.3 | 39.0 | 0.2 | 0.0 | ||||||
6f1t | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | HIS | K:100 | K:100 | 25.0 | 0.128 | T | -62.5 | -28.8 | 25.0 | 0.128 | 0.0 | ||||||
6f1u | 2 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | HIS | D:100 | K:100 | 25.0 | 0.128 | T | -62.5 | -28.8 | 25.0 | 0.128 | 0.0 | ||||||
6f38 | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | HIS | K:100 | K:100 | 76.0 | NA | S | -118.3 | -20.0 | 76.0 | NA | NA | ||||||
6f3a | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | HIS | K:100 | K:100 | 47.0 | NA | T | -66.4 | -28.6 | 47.0 | NA | NA | ||||||
6znl | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2020-07-29 | HIS | K:100 | K:100 | 28.0 | 0.144 | T | -71.9 | -31.7 | 28.0 | 0.144 | 0.0 | ||||||
1izn | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2003-04-08 | HIS | A:100 | A:100 | 45.0 | 0.231 | S | -70.9 | -33.8 | 45.0 | 0.231 | 0.0 |
HOH |
9.012 |
O |
O |
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HIS | C:100 | C:100 | 38.0 | 0.195 | S | -55.2 | -40.6 | NA | NA | NA | |||||||||||||
2kz7 | 1 | P13127 | 86.01 | 0.0 |
NMR |
2010-07-14 | HIS | A:100 | A:100 | 46.0 | 0.236 | S | -70.9 | -33.8 | 46.0 | 0.236 | 0.0 | ||||||
3aa0 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:100 | A:100 | 32.0 | 0.164 | T | -67.7 | -22.3 | 32.0 | 0.164 | 0.0 |
HOH |
2.737 |
NE2 |
O |
||
3aa1 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:100 | A:100 | 27.0 | 0.138 | T | -61.9 | -29.6 | 27.0 | 0.138 | 0.0 |
HOH |
2.652 |
NE2 |
O |
||
3aa6 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:100 | A:100 | 33.0 | 0.169 | T | -66.4 | -22.8 | 33.0 | 0.169 | 0.0 |
HOH |
2.734 |
NE2 |
O |
||
3aa7 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:100 | A:100 | 30.0 | 0.154 | T | -66.5 | -30.4 | 30.0 | 0.154 | 0.0 |
HOH |
2.856 |
N |
O |
||
3aaa | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | HIS | A:100 | A:100 | 35.0 | 0.179 | T | -61.2 | -32.2 | 35.0 | 0.179 | 0.0 |
HOH |
2.677 |
NE2 |
O |
||
3aae | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-11-17 | HIS | A:100 | A:100 | 31.0 | 0.159 | T | -69.5 | -22.4 | 31.0 | 0.159 | 0.0 | ||||||
HIS | C:100 | C:100 | 30.0 | 0.154 | T | -68.8 | -21.0 | NA | NA | NA | |||||||||||||
HIS | E:100 | E:100 | 30.0 | 0.154 | T | -66.9 | -23.5 | NA | NA | NA | |||||||||||||
HIS | G:100 | G:100 | 31.0 | 0.159 | T | -66.8 | -23.9 | NA | NA | NA | |||||||||||||
HIS | I:100 | I:100 | 31.0 | 0.159 | T | -68.0 | -24.1 | NA | NA | NA | |||||||||||||
3lk2 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:100 | A:100 | 34.0 | 0.174 | T | -69.0 | -27.1 | 34.0 | 0.174 | 0.0 |
HOH |
2.952 |
CE1 |
O |
||
3lk3 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:100 | A:100 | 32.0 | 0.164 | T | -74.3 | -22.5 | 32.0 | 0.164 | 0.0 |
HOH |
5.031 |
CE1 |
O |
||
3lk4 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | HIS | A:100 | A:100 | 34.0 | 0.174 | T | -65.0 | -30.1 | 34.0 | 0.174 | 0.0 |
HOH |
2.908 |
CE1 |
O |
||
HIS | D:100 | D:100 | 34.0 | 0.174 | T | -65.5 | -29.7 | NA | NA | NA | |||||||||||||
HIS | G:100 | G:100 | 34.0 | 0.174 | T | -65.6 | -30.1 | NA | NA | NA | |||||||||||||
HIS | J:100 | J:100 | 32.0 | 0.164 | T | -67.1 | -29.3 | NA | NA | NA | |||||||||||||
HIS | M:100 | M:100 | 32.0 | 0.164 | T | -65.5 | -30.1 | NA | NA | NA | |||||||||||||
HIS | P:100 | P:100 | 32.0 | 0.164 | T | -65.9 | -30.3 | NA | NA | NA | |||||||||||||
HIS | S:100 | S:100 | 33.0 | 0.169 | T | -66.7 | -30.6 | NA | NA | NA | |||||||||||||
HIS | V:100 | V:100 | 34.0 | 0.174 | T | -66.2 | -28.9 | NA | NA | NA | |||||||||||||
HIS | Y:100 | Y:100 | 34.0 | 0.174 | T | -67.1 | -29.8 | NA | NA | NA | |||||||||||||
HIS | BA:100 | 1:100 | 33.0 | 0.169 | T | -66.6 | -30.0 | NA | NA | NA | |||||||||||||
HIS | EA:100 | 4:100 | 32.0 | 0.164 | T | -66.1 | -30.5 | NA | NA | NA | |||||||||||||
HIS | HA:100 | 7:100 | 32.0 | 0.164 | T | -65.5 | -30.2 | NA | NA | NA | |||||||||||||
7ds2 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 33.0 | 0.169 | T | -70.5 | -19.1 | 33.0 | 0.169 | 0.0 |
HOH |
2.941 |
NE2 |
O |
||
7ds3 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 30.0 | 0.154 | T | -70.8 | -23.3 | 30.0 | 0.154 | 0.0 |
HOH |
2.746 |
NE2 |
O |
||
7ds4 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 25.0 | 0.128 | T | -76.6 | -23.0 | 25.0 | 0.128 | 0.0 |
HOH |
2.708 |
NE2 |
O |
||
7ds6 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 30.0 | 0.154 | T | -73.8 | -16.8 | 30.0 | 0.154 | 0.0 |
HOH |
2.746 |
N |
O |
||
7ds8 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 30.0 | 0.154 | T | -70.6 | -19.6 | 30.0 | 0.154 | 0.0 |
HOH |
2.887 |
N |
O |
||
7dsa | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 31.0 | 0.159 | T | -66.2 | -13.6 | 31.0 | 0.159 | 0.0 |
HOH |
8.890 |
O |
O |
||
7dsb | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | HIS | A:100 | A:100 | 33.0 | 0.169 | T | -59.3 | -33.9 | 33.0 | 0.169 | 0.0 |
HOH |
7.935 |
O |
O |
||
7ccc | 3 | Q5RKN9 | 86.01 | 0.0 |
X-RAY |
2021-02-03 | HIS | C:100 | C:100 | 22.0 | 0.113 | T | -73.5 | -47.2 | 22.0 | 0.113 | 0.0 |
HOH |
7.861 |
O |
O |
||
7pdz | 2 | P47753 | 86.01 | 0.0 |
EM |
2021-09-01 | HIS | B:100 | F:100 | 39.0 | 0.2 | S | -93.6 | -17.5 | 39.0 | 0.2 | 0.0 | ||||||
5adx | 4 | A0PFK5 | 87.27 | 7e-179 |
EM |
2015-12-30 | HIS | K:94 | K:100 | 40.0 | 0.205 | S | -92.2 | -30.3 | 40.0 | 0.205 | 0.0 | ||||||
5afu | 8 | A0PFK5 | 87.27 | 7e-179 |
EM |
2015-03-11 | HIS | Q:94 | K:100 | 40.0 | 0.205 | S | -92.2 | -30.3 | 40.0 | 0.205 | 0.0 | ||||||
2kxp | 1 | P13127 | 86.18 | 1e-177 |
NMR |
2010-06-09 | HIS | A:94 | A:100 | 50.0 | 0.256 | S | -36.4 | -67.3 | 50.0 | 0.256 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p47755-f1 | 1 | P47755 | 100.0 | 0.0 | HIS | A:100 | A:100 | 33.0 | 0.169 | T | -64.9 | -20.7 | |
af-p52907-f1 | 1 | P52907 | 86.71 | 0.0 | HIS | A:100 | A:100 | 25.0 | 0.128 | T | -65.4 | -19.7 |