Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 128607355 . T A CCDS5809.1:NM_012470.3:c.2690gAc>gTc_NP_036602.1:p.897D>V Homo sapiens transportin 3 (TNPO3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4c0o 1 Q9Y5L0 100.0 0.0 X-RAY
2014-01-22 ASP A:897 A:897 35.0 0.233 H -73.9 -18.9 35.0 0.233 0.0
ASP B:897 B:897 42.0 0.28 H -74.5 -20.3 NA NA NA
4c0q 1 Q9Y5L0 100.0 0.0 X-RAY
2014-01-22 ASP A:897 A:897 47.0 0.313 H -73.8 -18.8 47.0 0.313 0.0
ASP B:897 B:897 56.0 0.373 H -73.7 -18.8 NA NA NA
6gx9 1 Q9Y5L0 100.0 0.0 X-RAY
2019-03-13 ASP A:897 A:897 46.0 0.307 H -64.0 -36.4 46.0 0.307 0.0
ASP B:897 B:897 53.0 0.353 H -64.7 -36.3 NA NA NA
4c0p 1 Q9Y5L0 99.89 0.0 X-RAY
2014-01-22 ASP A:897 A:897 49.0 0.327 H -68.7 -37.7 49.0 0.327 0.0
ASP B:897 B:897 50.0 0.333 H -69.0 -37.9 NA NA NA
ASP C:897 C:897 47.0 0.313 H -68.7 -37.9 NA NA NA
ASP D:897 D:897 51.0 0.34 H -69.0 -37.9 NA NA NA
4ol0 2 Q9Y5L0 100.0 0.0 X-RAY
2014-04-09 ASP B:895 B:897 81.0 0.54 H -63.0 -37.1 81.0 0.54 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y5l0-f1 1 Q9Y5L0 100.0 0.0 ASP A:897 A:897 65.0 0.433 H -64.5 -44.6