Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 128610260 . G A CCDS5809.1:NM_012470.3:c.2540cCc>cTc_NP_036602.1:p.847P>L Homo sapiens transportin 3 (TNPO3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4c0o 1 Q9Y5L0 100.0 0.0 X-RAY
2014-01-22 PRO A:847 A:847 66.0 0.455 G -54.3 -18.2 19.0 0.131 0.324 C:Q07955:0.324
HOH
7.965
C
O
PRO B:847 B:847 68.0 0.469 G -54.6 -19.4 NA NA NA
4c0q 1 Q9Y5L0 100.0 0.0 X-RAY
2014-01-22 PRO A:847 A:847 86.0 0.593 G -54.8 -18.1 86.0 0.593 0.0
PRO B:847 B:847 88.0 0.607 G -54.5 -18.3 NA NA NA
6gx9 1 Q9Y5L0 100.0 0.0 X-RAY
2019-03-13 PRO A:847 A:847 63.0 0.434 G -65.2 -6.9 63.0 0.434 0.0
PRO B:847 B:847 88.0 0.607 G -65.2 -6.8 NA NA NA
4c0p 1 Q9Y5L0 99.89 0.0 X-RAY
2014-01-22 PRO A:847 A:847 91.0 0.628 G -59.3 -12.0 91.0 0.628 0.0
PRO B:847 B:847 90.0 0.621 T -59.0 -12.3 NA NA NA
PRO C:847 C:847 94.0 0.648 G -59.3 -11.8 NA NA NA
PRO D:847 D:847 90.0 0.621 G -59.4 -12.1 NA NA NA
4ol0 2 Q9Y5L0 100.0 0.0 X-RAY
2014-04-09 PRO B:845 B:847 85.0 0.586 G -65.8 -17.7 85.0 0.586 0.0 HOH
9.213
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y5l0-f1 1 Q9Y5L0 100.0 0.0 PRO A:847 A:847 83.0 0.572 G -61.3 -25.5