Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 22771064 . A C CCDS5375.1:NM_000600.3:c.511Aca>Cca_NP_000591.1:p.171T>P Homo sapiens interleukin 6 (IL6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1alu 1 P05231 100.0 1e-137 X-RAY
 1998-06-03 THR A:145 A:143 85.0 0.607 H -67.1 -34.1 85.0 0.607 0.0 HOH
 6.041
 N
 O
4ni7 1 P05231 100.0 1e-137 X-RAY
 2014-01-22 THR A:145 A:143 92.0 0.657 H -58.3 -41.9 92.0 0.657 0.0
4ni9 2 P05231 100.0 1e-137 X-RAY
 2014-01-22 THR B:145 A:143 108.0 0.771 H -62.8 -35.8 108.0 0.771 0.0 HOH
 7.521
 C
 O
THR C:145 C:143 94.0 0.671 T -93.6 -28.2 94.0 0.671 0.0 HOH
 8.405
 C
 O
4o9h 1 P05231 100.0 1e-137 X-RAY
 2015-04-15 THR A:145 A:143 90.0 0.643 H -66.7 -35.5 90.0 0.643 0.0 HOH
 7.289
 C
 O
1p9m 2 P05231 100.0 2e-136 X-RAY
 2003-07-01 THR B:145 B:143 88.0 0.629 H -77.7 -30.1 88.0 0.629 0.0
7nxz 1 P05231 99.45 4e-135 X-RAY
 2021-04-07 THR A:142 AAA:142 88.0 0.629 H -75.9 -39.1 88.0 0.629 0.0 HOH
 6.224
 HG21
 O
4cni 3 P05231 100.0 7e-126 X-RAY
 2014-04-30 THR C:130 C:143 89.0 0.636 H -55.0 -40.4 NA NA NA
THR D:130 D:143 87.0 0.621 H -56.7 -40.2 87.0 0.621 0.0 HOH
 3.031
 O
 O
4zs7 1 P05231 100.0 7e-126 X-RAY
 2016-05-04 THR A:130 A:143 79.0 0.564 H -60.0 -53.1 79.0 0.564 0.0 HOH
 6.545
 N
 O
4j4l 2 P05231 100.0 5e-121 X-RAY
 2014-02-12 THR C:127 C:143 85.0 0.607 H -50.4 -54.3 85.0 0.607 0.0 HOH
 7.139
 CB
 O
THR D:127 D:143 88.0 0.629 H -45.8 -36.0 NA NA NA
5fuc 1 P05231 99.39 8e-120 X-RAY
 2017-01-25 THR A:125 A:143 93.0 0.664 H -62.3 -39.1 93.0 0.664 0.0
THR B:125 B:143 93.0 0.664 H -62.8 -37.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05231-f1 1 P05231 100.0 1e-158 THR A:171 A:171 89.0 0.636 H -61.3 -43.7