Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 55211050 | . | G | A | CCDS5514.1:NM_005228.3:c.293cGa>cAa_NP_005219.2:p.98R>Q | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7syd | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:98 | A:74 | NA | NA | NA | NA | NA | NA | NA | NA | ||||||
ARG | C:98 | B:74 | 81.0 | 0.36 | B | -137.7 | 131.5 | 81.0 | 0.36 | 0.0 | |||||||||||||
7sye | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:98 | A:74 | 87.0 | 0.387 | B | -144.3 | 137.7 | 87.0 | 0.387 | 0.0 | ||||||
ARG | B:98 | B:74 | 120.0 | 0.533 | B | -129.0 | 103.9 | 120.0 | 0.533 | 0.0 | |||||||||||||
7sz5 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:98 | A:74 | 85.0 | 0.378 | B | -127.0 | 122.1 | 85.0 | 0.378 | 0.0 | ||||||
ARG | C:98 | B:74 | 78.0 | 0.347 | B | -149.0 | 175.7 | 78.0 | 0.347 | 0.0 | |||||||||||||
7sz7 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-15 | ARG | A:98 | A:74 | 102.0 | 0.453 | B | -142.8 | 127.6 | 102.0 | 0.453 | 0.0 | ||||||
ARG | C:98 | B:74 | 80.0 | 0.356 | B | -128.6 | 133.2 | 80.0 | 0.356 | 0.0 | |||||||||||||
7sz0 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | ARG | A:98 | A:74 | NA | NA | NA | NA | NA | NA | NA | NA | ||||||
ARG | C:98 | B:74 | NA | NA | NA | NA | NA | NA | NA | NA | |||||||||||||
7sz1 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | ARG | A:98 | A:74 | 97.0 | 0.431 | -44.1 | 138.1 | 97.0 | 0.431 | 0.0 | |||||||
ARG | C:98 | B:74 | 101.0 | 0.449 | B | -140.6 | 125.9 | 101.0 | 0.449 | 0.0 | |||||||||||||
5xwd | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2018-02-28 | ARG | A:98 | A:74 | 85.0 | 0.378 | B | -126.5 | 122.2 | 85.0 | 0.378 | 0.0 | ||||||
3qwq | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2012-02-01 | ARG | A:98 | A:74 | 84.0 | 0.373 | B | -131.7 | 134.8 | 84.0 | 0.373 | 0.0 |
HOH |
3.212 |
O |
O |
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1ivo | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2002-10-16 | ARG | A:74 | A:74 | 119.0 | 0.529 | B | -141.1 | 134.5 | 119.0 | 0.529 | 0.0 | ||||||
ARG | B:74 | B:74 | 71.0 | 0.316 | B | -124.2 | 119.6 | 71.0 | 0.316 | 0.0 |
HOH |
3.120 |
NH1 |
O |
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4uv7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-10-14 | ARG | A:74 | A:74 | 98.0 | 0.436 | B | -125.0 | 132.4 | 98.0 | 0.436 | 0.0 |
HOH |
9.681 |
NH1 |
O |
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3b2v | 3 | P00533 | 100.0 | 0.0 |
X-RAY |
2008-02-19 | ARG | C:74 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4kro | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2013-08-28 | ARG | A:74 | A:74 | 51.0 | NA | B | -120.3 | 144.0 | 51.0 | NA | NA | ||||||
1nql | 1 | 4885199 | 99.84 | 0.0 |
X-RAY |
2003-03-11 | ARG | A:74 | A:74 | 94.0 | 0.418 | B | -141.6 | 119.0 | 94.0 | 0.418 | 0.0 | ||||||
4krp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2013-08-28 | ARG | A:74 | A:74 | 47.0 | NA | B | -127.7 | 136.1 | 47.0 | NA | NA | ||||||
1yy9 | 1 | P00533 | 99.51 | 0.0 |
X-RAY |
2005-04-26 | ARG | A:74 | A:74 | 78.0 | 0.347 | B | -115.3 | 141.9 | 78.0 | 0.347 | 0.0 |
HOH |
5.056 |
N |
O |
||
6aru | 1 | P00533 | 99.68 | 0.0 |
X-RAY |
2018-08-29 | ARG | A:74 | A:74 | 83.0 | 0.369 | B | -132.6 | 134.3 | 83.0 | 0.369 | 0.0 | ||||||
3njp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2010-10-13 | ARG | A:74 | A:74 | NA | NA | NA | NA | NA | NA | NA | NA |
HOH |
4.582 |
N |
O |
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ARG | B:74 | B:74 | 144.0 | 0.64 | B | -129.5 | 132.4 | 144.0 | 0.64 | 0.0 | |||||||||||||
4uip | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-11-25 | ARG | A:73 | A:74 | 89.0 | 0.396 | B | -139.9 | 139.5 | 89.0 | 0.396 | 0.0 | ||||||
5wb7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | ARG | A:74 | A:74 | 88.0 | 0.391 | B | -130.7 | 125.0 | 88.0 | 0.391 | 0.0 | ||||||
ARG | B:74 | B:74 | 88.0 | 0.391 | B | -125.7 | 126.6 | NA | NA | NA | |||||||||||||
ARG | C:74 | C:74 | 95.0 | 0.422 | B | -126.6 | 125.2 | NA | NA | NA | |||||||||||||
ARG | D:74 | D:74 | 89.0 | 0.396 | B | -129.2 | 127.0 | 89.0 | 0.396 | 0.0 |
HOH |
4.712 |
NH2 |
O |
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5wb8 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | ARG | A:74 | A:74 | 80.0 | 0.356 | B | -135.7 | 139.7 | 80.0 | 0.356 | 0.0 |
HOH |
4.805 |
NH2 |
O |
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ARG | D:74 | D:74 | 77.0 | 0.342 | B | -133.0 | 127.0 | NA | NA | NA | |||||||||||||
1mox | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2003-09-10 | ARG | A:74 | A:74 | 72.0 | 0.32 | B | -139.4 | 137.9 | 72.0 | 0.32 | 0.0 |
HOH |
2.357 |
NH2 |
O |
||
ARG | B:74 | B:74 | 83.0 | 0.369 | B | -130.0 | 131.8 | 83.0 | 0.369 | 0.0 |
HOH |
7.430 |
NE |
O |
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7len | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:74 | A:74 | 105.0 | 0.467 | B | -140.0 | 138.5 | 105.0 | 0.467 | 0.0 | ||||||
ARG | B:74 | B:74 | 119.0 | 0.529 | B | -124.1 | 142.2 | NA | NA | NA | |||||||||||||
7lfr | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:74 | A:74 | 88.0 | 0.391 | B | -120.0 | 143.8 | 88.0 | 0.391 | 0.0 | ||||||
ARG | B:74 | B:74 | 104.0 | 0.462 | B | -132.0 | 138.0 | 104.0 | 0.462 | 0.0 | |||||||||||||
7lfs | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:74 | A:74 | 110.0 | 0.489 | B | -140.3 | 131.3 | 110.0 | 0.489 | 0.0 | ||||||
ARG | B:74 | B:74 | 85.0 | 0.378 | B | -131.1 | 133.4 | NA | NA | NA | |||||||||||||
ARG | C:74 | C:74 | 46.0 | NA | B | -128.0 | 129.4 | NA | NA | NA | |||||||||||||
ARG | D:74 | D:74 | 92.0 | 0.409 | B | -136.5 | 147.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00533-f1 | 1 | P00533 | 100.0 | 0.0 | ARG | A:98 | A:98 | 94.0 | 0.418 | B | -134.5 | 131.5 |