Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 55220340 | . | C | A | CCDS5514.1:NM_005228.3:c.730Cgg>Agg_NP_005219.2:p.244R>R | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7syd | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:244 | A:220 | 156.0 | 0.693 | S | -82.3 | 162.6 | 95.0 | 0.422 | 0.271 |
C:P00533:0.271 |
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ARG | C:244 | B:220 | 172.0 | 0.764 | S | -79.2 | -172.0 | 100.0 | 0.444 | 0.32 |
A:P00533:0.32 |
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7sye | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:244 | A:220 | 121.0 | 0.538 | S | -131.8 | 171.5 | 121.0 | 0.538 | 0.0 | ||||||
ARG | B:244 | B:220 | 146.0 | 0.649 | S | -90.3 | 180.0 | 146.0 | 0.649 | 0.0 | |||||||||||||
7sz5 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | ARG | A:244 | A:220 | 138.0 | 0.613 | S | -174.8 | 146.6 | 135.0 | 0.6 | 0.013 |
C:P00533:0.013 |
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ARG | C:244 | B:220 | 139.0 | 0.618 | S | -167.1 | 165.8 | 139.0 | 0.618 | 0.0 | |||||||||||||
7sz7 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-15 | ARG | A:244 | A:220 | 166.0 | 0.738 | S | -143.8 | 176.0 | 112.0 | 0.498 | 0.24 |
C:P00533:0.24 |
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ARG | C:244 | B:220 | 179.0 | 0.796 | S | -95.9 | -171.4 | 108.0 | 0.48 | 0.316 |
A:P00533:0.316 |
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7sz0 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | ARG | A:244 | A:220 | 174.0 | 0.773 | S | -79.2 | -174.5 | 95.0 | 0.422 | 0.351 |
C:P00533:0.351 |
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ARG | C:244 | B:220 | 151.0 | 0.671 | S | -97.1 | 164.5 | 89.0 | 0.396 | 0.275 |
A:P00533:0.276 |
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7sz1 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | ARG | A:244 | A:220 | 133.0 | 0.591 | S | -112.7 | 152.4 | 133.0 | 0.591 | 0.0 | ||||||
ARG | C:244 | B:220 | 154.0 | 0.684 | S | -78.3 | -174.4 | 154.0 | 0.684 | 0.0 | |||||||||||||
5xwd | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2018-02-28 | ARG | A:244 | A:220 | 155.0 | 0.689 | S | -75.8 | 175.6 | 155.0 | 0.689 | 0.0 | ||||||
3qwq | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2012-02-01 | ARG | A:244 | A:220 | 156.0 | 0.693 | S | -95.0 | 162.2 | 156.0 | 0.693 | 0.0 | ||||||
1ivo | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2002-10-16 | ARG | A:220 | A:220 | 150.0 | 0.667 | S | -77.0 | -170.4 | 129.0 | 0.573 | 0.094 |
B:P00533:0.093 |
HOH |
7.804 |
N |
O |
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ARG | B:220 | B:220 | 145.0 | 0.644 | S | -96.7 | -165.7 | 68.0 | 0.302 | 0.342 |
A:P00533:0.342 |
HOH |
7.986 |
N |
O |
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4uv7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-10-14 | ARG | A:220 | A:220 | 180.0 | 0.8 | S | -91.6 | 163.7 | 180.0 | 0.8 | 0.0 |
HOH |
5.657 |
CA |
O |
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3b2v | 3 | P00533 | 100.0 | 0.0 |
X-RAY |
2008-02-19 | ARG | C:220 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4kro | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2013-08-28 | ARG | A:220 | A:220 | 48.0 | NA | S | -171.3 | -173.7 | 48.0 | NA | NA | ||||||
1nql | 1 | 4885199 | 99.84 | 0.0 |
X-RAY |
2003-03-11 | ARG | A:220 | A:220 | 167.0 | 0.742 | S | -83.6 | 178.4 | 167.0 | 0.742 | 0.0 | ||||||
4krp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2013-08-28 | ARG | A:220 | A:220 | 44.0 | NA | S | -78.2 | 179.6 | 44.0 | NA | NA | ||||||
1yy9 | 1 | P00533 | 99.51 | 0.0 |
X-RAY |
2005-04-26 | ARG | A:220 | A:220 | 192.0 | 0.853 | S | -70.8 | 151.3 | 192.0 | 0.853 | 0.0 |
NAG NAG HOH |
7.158 6.701 5.729 |
NH2 NH1 NH1 |
O6 O3 O |
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6aru | 1 | P00533 | 99.68 | 0.0 |
X-RAY |
2018-08-29 | ARG | A:220 | A:220 | 169.0 | 0.751 | S | -93.2 | 164.0 | 169.0 | 0.751 | 0.0 | ||||||
3njp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2010-10-13 | ARG | A:220 | A:220 | 185.0 | 0.822 | S | -58.0 | 169.9 | 160.0 | 0.711 | 0.111 |
B:P00533:0.111 |
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ARG | B:220 | B:220 | 187.0 | 0.831 | S | -70.4 | 168.9 | 120.0 | 0.533 | 0.298 |
A:P00533:0.298 |
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4uip | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-11-25 | ARG | A:219 | A:220 | 155.0 | 0.689 | S | -62.5 | 160.6 | 155.0 | 0.689 | 0.0 |
HOH |
2.956 |
NH2 |
O |
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5wb7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | ARG | A:220 | A:220 | 157.0 | 0.698 | S | -79.7 | 171.3 | 157.0 | 0.698 | 0.0 | ||||||
ARG | B:220 | B:220 | 158.0 | 0.702 | S | -81.0 | 163.3 | NA | NA | NA | |||||||||||||
ARG | C:220 | C:220 | 131.0 | 0.582 | S | -72.0 | 162.1 | NA | NA | NA | |||||||||||||
ARG | D:220 | D:220 | 163.0 | 0.724 | S | -78.8 | 168.7 | 136.0 | 0.604 | 0.12 |
A:P00533:0.12 |
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5wb8 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | ARG | A:220 | A:220 | 133.0 | 0.591 | S | -89.6 | 167.7 | 133.0 | 0.591 | 0.0 |
HOH |
7.356 |
O |
O |
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ARG | D:220 | D:220 | 171.0 | 0.76 | S | -97.9 | 160.2 | NA | NA | NA | |||||||||||||
1mox | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2003-09-10 | ARG | A:220 | A:220 | 180.0 | 0.8 | S | -96.4 | -177.2 | 180.0 | 0.8 | 0.0 | ||||||
ARG | B:220 | B:220 | 150.0 | 0.667 | S | -67.8 | -164.5 | 150.0 | 0.667 | 0.0 | |||||||||||||
7len | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:220 | A:220 | 35.0 | NA | S | -75.7 | 169.1 | 35.0 | NA | NA | ||||||
ARG | B:220 | B:220 | 42.0 | NA | S | -90.7 | 172.8 | NA | NA | NA | |||||||||||||
7lfr | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:220 | A:220 | 170.0 | 0.756 | S | -63.2 | 164.0 | 170.0 | 0.756 | 0.0 | ||||||
ARG | B:220 | B:220 | 41.0 | NA | S | -115.5 | 170.1 | 41.0 | NA | NA | |||||||||||||
7lfs | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | ARG | A:220 | A:220 | 34.0 | NA | S | -137.8 | 158.8 | 34.0 | NA | NA | ||||||
ARG | B:220 | B:220 | 36.0 | NA | S | -89.8 | 155.7 | NA | NA | NA | |||||||||||||
ARG | C:220 | C:220 | 41.0 | NA | S | -69.8 | 156.3 | NA | NA | NA | |||||||||||||
ARG | D:220 | D:220 | 45.0 | NA | S | -73.4 | 155.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00533-f1 | 1 | P00533 | 100.0 | 0.0 | ARG | A:244 | A:244 | 173.0 | 0.769 | S | -93.7 | 162.3 |