Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 55223610 | . | G | A | CCDS5514.1:NM_005228.3:c.977tGt>tAt_NP_005219.2:p.326C>Y | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7syd | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | CYS | A:326 | A:302 | 28.0 | 0.207 | E | -149.0 | 127.5 | 28.0 | 0.207 | 0.0 | ||||||
CYS | C:326 | B:302 | 32.0 | 0.237 | E | -111.9 | 126.6 | 32.0 | 0.237 | 0.0 | |||||||||||||
7sye | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | CYS | A:326 | A:302 | 8.0 | 0.059 | E | -138.5 | 125.4 | 8.0 | 0.059 | 0.0 | ||||||
CYS | B:326 | B:302 | 26.0 | 0.193 | E | -129.0 | 116.2 | 26.0 | 0.193 | 0.0 | |||||||||||||
7sz5 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | CYS | A:326 | A:302 | 22.0 | 0.163 | -132.2 | 89.6 | 22.0 | 0.163 | 0.0 | |||||||
CYS | C:326 | B:302 | 26.0 | 0.193 | E | -160.4 | 126.3 | 26.0 | 0.193 | 0.0 | |||||||||||||
7sz7 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-15 | CYS | A:326 | A:302 | 30.0 | 0.222 | E | -155.6 | 134.4 | 30.0 | 0.222 | 0.0 | ||||||
CYS | C:326 | B:302 | 27.0 | 0.2 | E | -148.3 | 133.3 | 27.0 | 0.2 | 0.0 | |||||||||||||
7sz0 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | CYS | A:326 | A:302 | 21.0 | 0.156 | E | -151.3 | 128.3 | 21.0 | 0.156 | 0.0 | ||||||
CYS | C:326 | B:302 | 18.0 | 0.133 | E | -139.7 | 133.2 | 18.0 | 0.133 | 0.0 | |||||||||||||
7sz1 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | CYS | A:326 | A:302 | 19.0 | 0.141 | E | -134.4 | 123.8 | 19.0 | 0.141 | 0.0 | ||||||
CYS | C:326 | B:302 | 25.0 | 0.185 | -135.0 | 119.3 | 25.0 | 0.185 | 0.0 | ||||||||||||||
5xwd | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2018-02-28 | CYS | A:326 | A:302 | 2.0 | 0.015 | E | -81.8 | 142.0 | 2.0 | 0.015 | 0.0 |
ZN ZN ZN |
5.839 9.160 7.752 |
CB O CB |
ZN ZN ZN |
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3qwq | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2012-02-01 | CYS | A:326 | A:302 | 21.0 | 0.156 | E | -95.9 | 129.8 | 21.0 | 0.156 | 0.0 | ||||||
1ivo | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2002-10-16 | CYS | A:302 | A:302 | 34.0 | 0.252 | -159.6 | 161.6 | 34.0 | 0.252 | 0.0 | |||||||
CYS | B:302 | B:302 | 18.0 | 0.133 | -173.8 | 108.8 | 18.0 | 0.133 | 0.0 |
HOH |
6.738 |
SG |
O |
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4uv7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-10-14 | CYS | A:302 | A:302 | 17.0 | 0.126 | E | -91.6 | 126.0 | 17.0 | 0.126 | 0.0 |
HOH |
3.458 |
O |
O |
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3b2v | 3 | P00533 | 100.0 | 0.0 |
X-RAY |
2008-02-19 | CYS | C:302 | A:302 | 7.0 | 0.052 | E | -160.1 | 87.8 | 7.0 | 0.052 | 0.0 | ||||||
4kro | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2013-08-28 | CYS | A:302 | A:302 | 12.0 | 0.089 | E | -117.5 | 97.9 | 12.0 | 0.089 | 0.0 | ||||||
1nql | 1 | 4885199 | 99.84 | 0.0 |
X-RAY |
2003-03-11 | CYS | A:302 | A:302 | 6.0 | 0.044 | -99.4 | 128.2 | 6.0 | 0.044 | 0.0 | |||||||
4krp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2013-08-28 | CYS | A:302 | A:302 | 7.0 | 0.052 | E | -119.6 | 92.8 | 7.0 | 0.052 | 0.0 | ||||||
1yy9 | 1 | P00533 | 99.51 | 0.0 |
X-RAY |
2005-04-26 | CYS | A:302 | A:302 | 7.0 | 0.052 | E | -90.8 | 123.4 | 7.0 | 0.052 | 0.0 | ||||||
6aru | 1 | P00533 | 99.68 | 0.0 |
X-RAY |
2018-08-29 | CYS | A:302 | A:302 | 5.0 | 0.037 | E | -95.6 | 130.1 | 5.0 | 0.037 | 0.0 | ||||||
3njp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2010-10-13 | CYS | A:302 | A:302 | 23.0 | 0.17 | E | -114.0 | 128.5 | 22.0 | 0.163 | 0.007 |
B:P00533:0.007 |
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CYS | B:302 | B:302 | 28.0 | 0.207 | E | -122.1 | 105.2 | 26.0 | 0.193 | 0.014 |
A:P00533:0.015 |
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4uip | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-11-25 | CYS | A:301 | A:302 | 14.0 | 0.104 | E | -113.1 | 125.0 | 14.0 | 0.104 | 0.0 |
HOH |
7.290 |
SG |
O |
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5wb7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | CYS | A:302 | A:302 | 16.0 | 0.119 | E | -116.1 | 118.3 | 16.0 | 0.119 | 0.0 |
HOH |
8.415 |
SG |
O |
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CYS | B:302 | B:302 | 26.0 | 0.193 | E | -129.2 | 137.6 | NA | NA | NA | |||||||||||||
CYS | C:302 | C:302 | 2.0 | 0.015 | 57.7 | 62.7 | NA | NA | NA | ||||||||||||||
CYS | D:302 | D:302 | 4.0 | 0.03 | 61.3 | 49.5 | 4.0 | 0.03 | 0.0 |
HOH |
6.339 |
C |
O |
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5wb8 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | CYS | A:302 | A:302 | 18.0 | 0.133 | E | -94.9 | 105.6 | 18.0 | 0.133 | 0.0 |
HOH |
4.030 |
SG |
O |
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CYS | D:302 | D:302 | 6.0 | 0.044 | E | -92.5 | 128.2 | NA | NA | NA | |||||||||||||
1mox | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2003-09-10 | CYS | A:302 | A:302 | 16.0 | 0.119 | -78.3 | 172.9 | 16.0 | 0.119 | 0.0 |
PT PT |
8.031 9.294 |
O CB |
PT PT |
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CYS | B:302 | B:302 | 46.0 | 0.341 | E | -90.8 | 159.9 | 46.0 | 0.341 | 0.0 |
PT HOH |
9.717 8.036 |
CB C |
PT O |
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7len | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | CYS | A:302 | A:302 | 17.0 | 0.126 | E | -87.0 | 145.4 | 17.0 | 0.126 | 0.0 | ||||||
CYS | B:302 | B:302 | 19.0 | 0.141 | E | -93.9 | 122.3 | NA | NA | NA | |||||||||||||
7lfr | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | CYS | A:302 | A:302 | 26.0 | 0.193 | E | -78.3 | 138.3 | 26.0 | 0.193 | 0.0 | ||||||
CYS | B:302 | B:302 | 12.0 | 0.089 | E | -76.9 | 136.0 | 12.0 | 0.089 | 0.0 | |||||||||||||
7lfs | 1 | P00533 | 99.8 | 0.0 |
X-RAY |
2021-11-17 | CYS | A:302 | A:302 | 49.0 | 0.363 | E | -98.6 | 101.6 | 49.0 | 0.363 | 0.0 | ||||||
CYS | B:302 | B:302 | 33.0 | 0.244 | E | -122.2 | 124.4 | NA | NA | NA | |||||||||||||
CYS | C:302 | C:302 | 8.0 | 0.059 | 50.4 | 53.3 | NA | NA | NA | ||||||||||||||
CYS | D:302 | D:302 | 13.0 | 0.096 | 54.4 | 51.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00533-f1 | 1 | P00533 | 100.0 | 0.0 | CYS | A:326 | A:326 | 7.0 | 0.052 | E | -95.5 | 117.4 |