Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 905679 . C A CCDS47525.1:NM_001130965.2:c.1955tCg>tAg_NP_001124437.1:p.652S>* Homo sapiens Sad1 and UNC84 domain containing 1 (SUN1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6r15 1 O94901 98.51 1e-143 X-RAY
 2020-04-01 SER A:70 A:679 70.0 0.609 -143.2 154.4 46.0 0.4 0.209 B:Q8NF91:0.209
 HOH
 2.882
 HB2
 O
6r16 1 O94901 98.51 1e-143 X-RAY
 2020-07-15 SER A:70 A:679 49.0 0.426 -143.0 141.3 21.0 0.183 0.243 I:Q8N205:0.009
H:Q8N205:0.243
 EDO
HOH
 8.473
6.458
 N
O
 C1
O
SER B:70 B:679 52.0 0.452 -143.4 140.7 17.0 0.148 0.304 I:Q8N205:0.304
 HOH
 3.726
 OG
 O
SER C:70 C:679 52.0 0.452 -143.1 140.6 19.0 0.165 0.287 J:Q8N205:0.278
H:Q8N205:0.009
 HOH
 6.316
 O
 O
SER D:70 D:679 55.0 0.478 -143.8 140.9 29.0 0.252 0.226 K:Q8N205:0.017
L:Q8N205:0.209
 EDO
HOH
 8.459
6.633
 N
CA
 C2
O
SER E:70 E:679 54.0 0.47 -143.0 140.7 23.0 0.2 0.27 K:Q8N205:0.252
G:Q8N205:0.017
SER F:70 F:679 53.0 0.461 -145.2 141.9 23.0 0.2 0.261 L:Q8N205:0.017
G:Q8N205:0.243
 EDO
HOH
 8.294
3.421
 N
OG
 O2
O
6r2i 1 O94901 98.51 1e-143 X-RAY
 2020-07-15 SER A:70 A:679 69.0 0.6 -143.7 154.4 34.0 0.296 0.304 B:None:0.304
 HOH
 2.125
 H
 O
5ywz 1 Q9D666 82.72 4e-142 X-RAY
 2018-02-21 SER A:110 A:781 12.0 0.104 -71.0 160.2 12.0 0.104 0.0 HOH
 2.533
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o94901-f1 1 O94901 96.67 0.0 SER A:679 A:679 37.0 0.322 -58.3 132.8