Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 116528193 . G A CCDS5768.1:NM_006136.2:c.52Gca>Aca_NP_006127.1:p.18A>T Homo sapiens capping actin protein of muscle Z-line alpha subunit 2 (CAPZA2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5nw4 13 A0PFK5 87.06 0.0 EM
 2017-08-02 ALA U:18 Y:18 34.0 0.296 H -64.0 -46.1 34.0 0.296 0.0
6f1t 4 A0PFK5 87.06 0.0 EM
 2018-01-17 ALA K:18 K:18 28.0 0.243 H -64.5 -37.2 28.0 0.243 0.0
6f1u 2 A0PFK5 87.06 0.0 EM
 2018-01-17 ALA D:18 K:18 28.0 0.243 H -64.5 -37.2 28.0 0.243 0.0
6f38 4 A0PFK5 87.06 0.0 EM
 2018-01-17 ALA K:18 K:18 34.0 0.296 H -67.9 -42.9 34.0 0.296 0.0
6f3a 4 A0PFK5 87.06 0.0 EM
 2018-01-17 ALA K:18 K:18 21.0 0.183 H -63.3 -39.4 21.0 0.183 0.0
6znl 4 A0PFK5 87.06 0.0 EM
 2020-07-29 ALA K:18 K:18 16.0 0.139 H -62.6 -39.7 16.0 0.139 0.0
1izn 1 P13127 86.01 0.0 X-RAY
 2003-04-08 ALA A:18 A:18 30.0 0.261 H -63.1 -41.2 30.0 0.261 0.0 HOH
 3.638
 CB
 O
ALA C:18 C:18 26.0 0.226 H -63.3 -40.1 NA NA NA
2kz7 1 P13127 86.01 0.0 NMR
 2010-07-14 ALA A:18 A:18 29.0 0.252 H -63.1 -41.2 29.0 0.252 0.0
3aa0 1 P13127 86.01 0.0 X-RAY
 2010-08-04 ALA A:18 A:18 4.0 0.035 H -66.1 -41.2 4.0 0.035 0.0 HOH
 3.607
 CB
 O
3aa1 1 P13127 86.01 0.0 X-RAY
 2010-08-04 ALA A:18 A:18 4.0 0.035 H -68.0 -43.5 4.0 0.035 0.0 HOH
 3.569
 CB
 O
3aa6 1 P13127 86.01 0.0 X-RAY
 2010-08-04 ALA A:18 A:18 4.0 0.035 H -58.3 -43.6 4.0 0.035 0.0 HOH
 3.709
 CB
 O
3aa7 1 P13127 86.01 0.0 X-RAY
 2010-08-04 ALA A:18 A:18 5.0 0.043 H -60.7 -44.2 5.0 0.043 0.0 HOH
 3.802
 CB
 O
3aaa 1 P13127 86.01 0.0 X-RAY
 2010-08-04 ALA A:18 A:18 17.0 0.148 H -67.2 -39.1 17.0 0.148 0.0 HOH
 7.514
 O
 O
3aae 1 P13127 86.01 0.0 X-RAY
 2010-11-17 ALA A:18 A:18 18.0 0.157 H -67.6 -46.0 18.0 0.157 0.0
ALA C:18 C:18 17.0 0.148 H -67.4 -48.1 NA NA NA
ALA E:18 E:18 18.0 0.157 H -69.0 -48.7 NA NA NA
ALA G:18 G:18 18.0 0.157 H -68.0 -49.5 NA NA NA
ALA I:18 I:18 17.0 0.148 H -70.4 -47.8 NA NA NA
3lk2 1 P13127 86.01 0.0 X-RAY
 2010-04-07 ALA A:18 A:18 15.0 0.13 H -62.1 -45.0 15.0 0.13 0.0 HOH
 3.481
 CB
 O
3lk3 1 P13127 86.01 0.0 X-RAY
 2010-04-07 ALA A:18 A:18 18.0 0.157 H -63.2 -46.0 18.0 0.157 0.0 HOH
 3.348
 CB
 O
3lk4 1 P13127 86.01 0.0 X-RAY
 2010-04-07 ALA A:18 A:18 4.0 0.035 H -61.2 -41.9 4.0 0.035 0.0 HOH
 3.597
 CB
 O
ALA D:18 D:18 4.0 0.035 H -59.5 -44.7 NA NA NA
ALA G:18 G:18 4.0 0.035 H -62.5 -46.5 NA NA NA
ALA J:18 J:18 5.0 0.043 H -58.6 -44.3 NA NA NA
ALA M:18 M:18 6.0 0.052 H -61.0 -46.8 NA NA NA
ALA P:18 P:18 6.0 0.052 H -63.4 -40.6 NA NA NA
ALA S:18 S:18 4.0 0.035 H -59.9 -45.0 NA NA NA
ALA V:18 V:18 4.0 0.035 H -62.5 -45.7 NA NA NA
ALA Y:18 Y:18 4.0 0.035 H -60.4 -42.5 NA NA NA
ALA BA:18 1:18 5.0 0.043 H -59.7 -43.0 NA NA NA
ALA EA:18 4:18 5.0 0.043 H -60.1 -45.4 NA NA NA
ALA HA:18 7:18 6.0 0.052 H -59.2 -47.3 NA NA NA
7ds2 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 10.0 0.087 H -60.7 -38.6 10.0 0.087 0.0 HOH
 3.583
 O
 O
7ds3 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 25.0 0.217 H -63.1 -36.8 25.0 0.217 0.0 HOH
 3.627
 CB
 O
7ds4 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 9.0 0.078 H -68.4 -35.5 9.0 0.078 0.0 HOH
 3.644
 O
 O
7ds6 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 6.0 0.052 H -67.6 -40.7 6.0 0.052 0.0 HOH
 3.459
 CB
 O
7ds8 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 15.0 0.13 H -63.0 -37.8 15.0 0.13 0.0 HOH
 3.706
 CB
 O
7dsa 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 7.0 0.061 H -68.3 -36.0 7.0 0.061 0.0 HOH
 7.347
 O
 O
7dsb 1 P13127 86.01 0.0 X-RAY
 2021-03-03 ALA A:18 A:18 11.0 0.096 H -63.2 -45.8 11.0 0.096 0.0
7ccc 3 Q5RKN9 86.01 0.0 X-RAY
 2021-02-03 ALA C:18 C:18 18.0 0.157 H -65.6 -40.6 18.0 0.157 0.0
7pdz 2 P47753 86.01 0.0 EM
 2021-09-01 ALA B:18 F:18 42.0 0.365 H -56.8 -45.3 42.0 0.365 0.0
5adx 4 A0PFK5 87.27 7e-179 EM
 2015-12-30 ALA K:12 K:18 32.0 0.278 H -64.0 -46.2 32.0 0.278 0.0
5afu 8 A0PFK5 87.27 7e-179 EM
 2015-03-11 ALA Q:12 K:18 32.0 0.278 H -64.0 -46.2 32.0 0.278 0.0
2kxp 1 P13127 86.18 1e-177 NMR
 2010-06-09 ALA A:12 A:18 27.0 0.235 H -70.0 -37.7 27.0 0.235 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p47755-f1 1 P47755 100.0 0.0 ALA A:18 A:18 4.0 0.035 H -59.0 -41.1
af-p52907-f1 1 P52907 86.71 0.0 ALA A:18 A:18 22.0 0.191 H -58.6 -41.4