Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 116528194 | . | C | A | CCDS5768.1:NM_006136.2:c.53gCa>gAa_NP_006127.1:p.18A>E | Homo sapiens capping actin protein of muscle Z-line alpha subunit 2 (CAPZA2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5nw4 | 13 | A0PFK5 | 87.06 | 0.0 |
EM |
2017-08-02 | ALA | U:18 | Y:18 | 34.0 | 0.296 | H | -64.0 | -46.1 | 34.0 | 0.296 | 0.0 | ||||||
6f1t | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | ALA | K:18 | K:18 | 28.0 | 0.243 | H | -64.5 | -37.2 | 28.0 | 0.243 | 0.0 | ||||||
6f1u | 2 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | ALA | D:18 | K:18 | 28.0 | 0.243 | H | -64.5 | -37.2 | 28.0 | 0.243 | 0.0 | ||||||
6f38 | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | ALA | K:18 | K:18 | 34.0 | 0.296 | H | -67.9 | -42.9 | 34.0 | 0.296 | 0.0 | ||||||
6f3a | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2018-01-17 | ALA | K:18 | K:18 | 21.0 | 0.183 | H | -63.3 | -39.4 | 21.0 | 0.183 | 0.0 | ||||||
6znl | 4 | A0PFK5 | 87.06 | 0.0 |
EM |
2020-07-29 | ALA | K:18 | K:18 | 16.0 | 0.139 | H | -62.6 | -39.7 | 16.0 | 0.139 | 0.0 | ||||||
1izn | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2003-04-08 | ALA | A:18 | A:18 | 30.0 | 0.261 | H | -63.1 | -41.2 | 30.0 | 0.261 | 0.0 |
HOH |
3.638 |
CB |
O |
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ALA | C:18 | C:18 | 26.0 | 0.226 | H | -63.3 | -40.1 | NA | NA | NA | |||||||||||||
2kz7 | 1 | P13127 | 86.01 | 0.0 |
NMR |
2010-07-14 | ALA | A:18 | A:18 | 29.0 | 0.252 | H | -63.1 | -41.2 | 29.0 | 0.252 | 0.0 | ||||||
3aa0 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | ALA | A:18 | A:18 | 4.0 | 0.035 | H | -66.1 | -41.2 | 4.0 | 0.035 | 0.0 |
HOH |
3.607 |
CB |
O |
||
3aa1 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | ALA | A:18 | A:18 | 4.0 | 0.035 | H | -68.0 | -43.5 | 4.0 | 0.035 | 0.0 |
HOH |
3.569 |
CB |
O |
||
3aa6 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | ALA | A:18 | A:18 | 4.0 | 0.035 | H | -58.3 | -43.6 | 4.0 | 0.035 | 0.0 |
HOH |
3.709 |
CB |
O |
||
3aa7 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | ALA | A:18 | A:18 | 5.0 | 0.043 | H | -60.7 | -44.2 | 5.0 | 0.043 | 0.0 |
HOH |
3.802 |
CB |
O |
||
3aaa | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-08-04 | ALA | A:18 | A:18 | 17.0 | 0.148 | H | -67.2 | -39.1 | 17.0 | 0.148 | 0.0 |
HOH |
7.514 |
O |
O |
||
3aae | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-11-17 | ALA | A:18 | A:18 | 18.0 | 0.157 | H | -67.6 | -46.0 | 18.0 | 0.157 | 0.0 | ||||||
ALA | C:18 | C:18 | 17.0 | 0.148 | H | -67.4 | -48.1 | NA | NA | NA | |||||||||||||
ALA | E:18 | E:18 | 18.0 | 0.157 | H | -69.0 | -48.7 | NA | NA | NA | |||||||||||||
ALA | G:18 | G:18 | 18.0 | 0.157 | H | -68.0 | -49.5 | NA | NA | NA | |||||||||||||
ALA | I:18 | I:18 | 17.0 | 0.148 | H | -70.4 | -47.8 | NA | NA | NA | |||||||||||||
3lk2 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | ALA | A:18 | A:18 | 15.0 | 0.13 | H | -62.1 | -45.0 | 15.0 | 0.13 | 0.0 |
HOH |
3.481 |
CB |
O |
||
3lk3 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | ALA | A:18 | A:18 | 18.0 | 0.157 | H | -63.2 | -46.0 | 18.0 | 0.157 | 0.0 |
HOH |
3.348 |
CB |
O |
||
3lk4 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2010-04-07 | ALA | A:18 | A:18 | 4.0 | 0.035 | H | -61.2 | -41.9 | 4.0 | 0.035 | 0.0 |
HOH |
3.597 |
CB |
O |
||
ALA | D:18 | D:18 | 4.0 | 0.035 | H | -59.5 | -44.7 | NA | NA | NA | |||||||||||||
ALA | G:18 | G:18 | 4.0 | 0.035 | H | -62.5 | -46.5 | NA | NA | NA | |||||||||||||
ALA | J:18 | J:18 | 5.0 | 0.043 | H | -58.6 | -44.3 | NA | NA | NA | |||||||||||||
ALA | M:18 | M:18 | 6.0 | 0.052 | H | -61.0 | -46.8 | NA | NA | NA | |||||||||||||
ALA | P:18 | P:18 | 6.0 | 0.052 | H | -63.4 | -40.6 | NA | NA | NA | |||||||||||||
ALA | S:18 | S:18 | 4.0 | 0.035 | H | -59.9 | -45.0 | NA | NA | NA | |||||||||||||
ALA | V:18 | V:18 | 4.0 | 0.035 | H | -62.5 | -45.7 | NA | NA | NA | |||||||||||||
ALA | Y:18 | Y:18 | 4.0 | 0.035 | H | -60.4 | -42.5 | NA | NA | NA | |||||||||||||
ALA | BA:18 | 1:18 | 5.0 | 0.043 | H | -59.7 | -43.0 | NA | NA | NA | |||||||||||||
ALA | EA:18 | 4:18 | 5.0 | 0.043 | H | -60.1 | -45.4 | NA | NA | NA | |||||||||||||
ALA | HA:18 | 7:18 | 6.0 | 0.052 | H | -59.2 | -47.3 | NA | NA | NA | |||||||||||||
7ds2 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 10.0 | 0.087 | H | -60.7 | -38.6 | 10.0 | 0.087 | 0.0 |
HOH |
3.583 |
O |
O |
||
7ds3 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 25.0 | 0.217 | H | -63.1 | -36.8 | 25.0 | 0.217 | 0.0 |
HOH |
3.627 |
CB |
O |
||
7ds4 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 9.0 | 0.078 | H | -68.4 | -35.5 | 9.0 | 0.078 | 0.0 |
HOH |
3.644 |
O |
O |
||
7ds6 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 6.0 | 0.052 | H | -67.6 | -40.7 | 6.0 | 0.052 | 0.0 |
HOH |
3.459 |
CB |
O |
||
7ds8 | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 15.0 | 0.13 | H | -63.0 | -37.8 | 15.0 | 0.13 | 0.0 |
HOH |
3.706 |
CB |
O |
||
7dsa | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 7.0 | 0.061 | H | -68.3 | -36.0 | 7.0 | 0.061 | 0.0 |
HOH |
7.347 |
O |
O |
||
7dsb | 1 | P13127 | 86.01 | 0.0 |
X-RAY |
2021-03-03 | ALA | A:18 | A:18 | 11.0 | 0.096 | H | -63.2 | -45.8 | 11.0 | 0.096 | 0.0 | ||||||
7ccc | 3 | Q5RKN9 | 86.01 | 0.0 |
X-RAY |
2021-02-03 | ALA | C:18 | C:18 | 18.0 | 0.157 | H | -65.6 | -40.6 | 18.0 | 0.157 | 0.0 | ||||||
7pdz | 2 | P47753 | 86.01 | 0.0 |
EM |
2021-09-01 | ALA | B:18 | F:18 | 42.0 | 0.365 | H | -56.8 | -45.3 | 42.0 | 0.365 | 0.0 | ||||||
5adx | 4 | A0PFK5 | 87.27 | 7e-179 |
EM |
2015-12-30 | ALA | K:12 | K:18 | 32.0 | 0.278 | H | -64.0 | -46.2 | 32.0 | 0.278 | 0.0 | ||||||
5afu | 8 | A0PFK5 | 87.27 | 7e-179 |
EM |
2015-03-11 | ALA | Q:12 | K:18 | 32.0 | 0.278 | H | -64.0 | -46.2 | 32.0 | 0.278 | 0.0 | ||||||
2kxp | 1 | P13127 | 86.18 | 1e-177 |
NMR |
2010-06-09 | ALA | A:12 | A:18 | 27.0 | 0.235 | H | -70.0 | -37.7 | 27.0 | 0.235 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p47755-f1 | 1 | P47755 | 100.0 | 0.0 | ALA | A:18 | A:18 | 4.0 | 0.035 | H | -59.0 | -41.1 | |
af-p52907-f1 | 1 | P52907 | 86.71 | 0.0 | ALA | A:18 | A:18 | 22.0 | 0.191 | H | -58.6 | -41.4 |