Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 130021986 | . | C | A | CCDS5820.1:NM_001868.2:c.419cCg>cAg_NP_001859.1:p.140P>Q | Homo sapiens carboxypeptidase A1 (pancreatic) (CPA1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5om9 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2017-08-09 | PRO | A:140 | A:30 | 83.0 | 0.572 | T | -67.1 | -20.2 | 83.0 | 0.572 | 0.0 |
HOH |
9.113 |
O |
O |
||
PRO | B:140 | B:30 | 81.0 | 0.559 | T | -68.8 | -20.0 | 81.0 | 0.559 | 0.0 |
HOH |
3.287 |
N |
O |
|||||||||
4uf4 | 1 | P15085 | 99.76 | 0.0 |
X-RAY |
2016-01-20 | PRO | A:140 | A:140 | 83.0 | 0.572 | T | -66.6 | -21.2 | 83.0 | 0.572 | 0.0 |
HOH |
8.976 |
O |
O |
||
PRO | B:140 | B:140 | 81.0 | 0.559 | T | -68.3 | -21.2 | NA | NA | NA | |||||||||||||
1pca | 1 | P09954 | 81.55 | 0.0 |
X-RAY |
1993-10-31 | PRO | A:125 | A:30 | 100.0 | 0.69 | T | -66.8 | -19.7 | 100.0 | 0.69 | 0.0 |
HOH |
2.888 |
O |
O |
||
2v77 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-07-01 | PRO | A:30 | A:30 | 76.0 | 0.524 | T | -55.0 | -24.0 | 76.0 | 0.524 | 0.0 |
HOH |
2.820 |
O |
O |
||
PRO | B:30 | B:30 | 82.0 | 0.566 | T | -53.6 | -30.1 | NA | NA | NA | |||||||||||||
4uee | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | PRO | A:30 | A:30 | 88.0 | 0.607 | T | -71.7 | -17.6 | 88.0 | 0.607 | 0.0 |
HOH |
2.977 |
CG |
O |
||
PRO | B:30 | B:30 | 82.0 | 0.566 | T | -68.9 | -19.7 | 82.0 | 0.566 | 0.0 |
HOH |
2.806 |
O |
O |
|||||||||
4uef | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | PRO | A:30 | A:140 | 84.0 | 0.579 | T | -73.3 | -20.2 | 84.0 | 0.579 | 0.0 |
HOH |
2.861 |
O |
O |
||
PRO | B:30 | B:140 | 81.0 | 0.559 | T | -76.9 | -13.9 | NA | NA | NA | |||||||||||||
4uez | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | PRO | A:30 | A:140 | 84.0 | 0.579 | T | -64.4 | -24.9 | 84.0 | 0.579 | 0.0 |
HOH |
3.544 |
N |
O |
||
PRO | B:30 | B:140 | 82.0 | 0.566 | T | -69.6 | -18.2 | NA | NA | NA | |||||||||||||
6i6z | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2018-12-12 | PRO | A:30 | A:140 | 85.0 | 0.586 | T | -65.3 | -22.7 | 85.0 | 0.586 | 0.0 |
HOH |
2.829 |
O |
O |
||
PRO | B:30 | B:140 | 84.0 | 0.579 | T | -73.9 | -12.9 | 84.0 | 0.579 | 0.0 |
HOH |
2.757 |
O |
O |
|||||||||
3fju | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-12-30 | PRO | A:29 | A:30 | 76.0 | 0.524 | T | -68.8 | -16.9 | 76.0 | 0.524 | 0.0 |
ZN ZN CAC CAC ACT HOH |
8.437 4.258 4.945 5.903 3.440 3.070 |
CG CG CG CG CD O |
ZN ZN O2 O2 OXT O |
||
1pyt | 2 | P00730 | 81.23 | 0.0 |
X-RAY |
1997-01-27 | PRO | B:30 | B:30 | 90.0 | 0.621 | T | -50.9 | -30.0 | 90.0 | 0.621 | 0.0 |
HOH |
3.187 |
O |
O |
||
3kgq | 1 | P00730 | 81.23 | 0.0 |
X-RAY |
2010-10-27 | PRO | A:30 | A:30 | 84.0 | 0.579 | T | -65.7 | -21.0 | 84.0 | 0.579 | 0.0 |
HOH |
2.789 |
O |
O |
||
1arm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1996-08-17 | PRO | A:30 | A:30 | 84.0 | 0.579 | T | -56.8 | -22.7 | 84.0 | 0.579 | 0.0 |
HG HG HOH |
8.961 5.497 3.341 |
N N O |
HG HG O |
||
1ee3 | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | PRO | A:30 | P:30 | 68.0 | 0.469 | T | -51.7 | -30.9 | 68.0 | 0.469 | 0.0 |
CD HOH |
8.968 2.859 |
CD O |
CD O |
||
1ell | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | PRO | A:30 | P:30 | 70.0 | 0.483 | T | -53.9 | -27.6 | 70.0 | 0.483 | 0.0 |
CD HOH |
8.692 2.811 |
CD O |
CD O |
||
1elm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | PRO | A:30 | P:30 | 73.0 | 0.503 | T | -55.5 | -27.5 | 73.0 | 0.503 | 0.0 |
HOH |
2.961 |
O |
O |
||
1yme | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1997-02-12 | PRO | A:30 | A:30 | 76.0 | 0.524 | T | -62.3 | -24.0 | 76.0 | 0.524 | 0.0 |
HOH |
3.338 |
N |
O |
||
1zlh | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2005-07-05 | PRO | A:30 | A:30 | 83.0 | 0.572 | T | -66.2 | -20.3 | 83.0 | 0.572 | 0.0 |
ZN HOH |
8.695 2.736 |
CD O |
ZN O |
||
2abz | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2006-01-31 | PRO | A:30 | A:30 | 74.0 | 0.51 | T | -65.7 | -28.4 | 74.0 | 0.51 | 0.0 | ||||||
PRO | B:30 | B:30 | 84.0 | 0.579 | T | -66.7 | -17.8 | 84.0 | 0.579 | 0.0 | |||||||||||||
3hlp | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | PRO | A:30 | A:30 | 97.0 | 0.669 | T | -67.2 | -18.2 | 97.0 | 0.669 | 0.0 |
HOH |
2.720 |
O |
O |
||
PRO | B:30 | B:30 | 101.0 | 0.697 | T | -69.3 | -20.8 | NA | NA | NA | |||||||||||||
3huv | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | PRO | A:30 | A:30 | 99.0 | 0.683 | T | -66.0 | -22.2 | 99.0 | 0.683 | 0.0 |
HOH |
2.882 |
O |
O |
||
3i1u | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2009-11-17 | PRO | A:30 | A:30 | 83.0 | 0.572 | T | -62.7 | -23.7 | 83.0 | 0.572 | 0.0 |
HOH |
2.780 |
O |
O |
||
1hdq | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
2001-11-15 | PRO | A:30 | A:30 | 80.0 | 0.552 | T | -54.0 | -28.7 | 80.0 | 0.552 | 0.0 |
HOH |
3.012 |
O |
O |
||
2ctb | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | PRO | A:30 | A:30 | 78.0 | 0.538 | T | -58.0 | -24.5 | 78.0 | 0.538 | 0.0 |
HOH |
2.976 |
O |
O |
||
2ctc | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | PRO | A:30 | A:30 | 85.0 | 0.586 | T | -57.5 | -27.1 | 85.0 | 0.586 | 0.0 |
HOH |
3.319 |
O |
O |
||
1arl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1996-08-01 | PRO | A:30 | A:30 | 82.0 | 0.566 | T | -54.2 | -24.5 | 82.0 | 0.566 | 0.0 |
HOH |
3.232 |
CD |
O |
||
1cpx | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1998-08-05 | PRO | A:30 | A:30 | 92.0 | 0.634 | T | -61.3 | -24.1 | 92.0 | 0.634 | 0.0 |
HOH |
2.815 |
O |
O |
||
1f57 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2000-09-06 | PRO | A:30 | A:30 | 89.0 | 0.614 | T | -60.8 | -25.4 | 89.0 | 0.614 | 0.0 |
HOH |
2.959 |
O |
O |
||
1m4l | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2003-01-10 | PRO | A:30 | A:30 | 77.0 | 0.531 | T | -68.5 | -18.6 | 77.0 | 0.531 | 0.0 |
HOH |
3.173 |
CB |
O |
||
2rfh | 1 | A6H6Y4 | 81.11 | 0.0 |
X-RAY |
2008-04-22 | PRO | A:30 | A:30 | 102.0 | 0.703 | T | -67.3 | -16.4 | 102.0 | 0.703 | 0.0 |
HOH |
2.649 |
O |
O |
||
3fvl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2010-01-12 | PRO | A:30 | A:30 | 78.0 | 0.538 | T | -56.3 | -28.9 | 78.0 | 0.538 | 0.0 |
HOH |
2.679 |
O |
O |
||
PRO | B:30 | C:30 | 79.0 | 0.545 | T | -56.6 | -32.2 | 79.0 | 0.545 | 0.0 |
HOH |
2.752 |
O |
O |
|||||||||
PRO | C:30 | E:30 | 79.0 | 0.545 | T | -58.6 | -25.8 | 79.0 | 0.545 | 0.0 |
HOH |
2.563 |
O |
O |
|||||||||
3fx6 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2009-08-25 | PRO | A:30 | A:30 | 78.0 | 0.538 | T | -56.2 | -29.0 | 78.0 | 0.538 | 0.0 |
HOH |
2.655 |
O |
O |
||
PRO | B:30 | C:30 | 79.0 | 0.545 | T | -56.2 | -31.8 | 79.0 | 0.545 | 0.0 |
HOH |
2.755 |
O |
O |
|||||||||
PRO | C:30 | E:30 | 78.0 | 0.538 | T | -59.0 | -25.6 | 78.0 | 0.538 | 0.0 |
HOH |
2.584 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15085-f1 | 1 | P15085 | 100.0 | 0.0 | PRO | A:140 | A:140 | 85.0 | 0.586 | T | -67.6 | -14.1 |