Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 130023254 | . | G | A | CCDS5820.1:NM_001868.2:c.506cGt>cAt_NP_001859.1:p.169R>H | Homo sapiens carboxypeptidase A1 (pancreatic) (CPA1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5om9 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2017-08-09 | ARG | A:169 | A:59 | 65.0 | 0.289 | -60.3 | 154.8 | 65.0 | 0.289 | 0.0 |
HOH |
2.758 |
O |
O |
|||
ARG | B:169 | B:59 | 67.0 | 0.298 | -55.6 | 157.5 | 67.0 | 0.298 | 0.0 |
HOH |
2.837 |
O |
O |
||||||||||
4uf4 | 1 | P15085 | 99.76 | 0.0 |
X-RAY |
2016-01-20 | ARG | A:169 | A:169 | 65.0 | 0.289 | -57.7 | 155.6 | 65.0 | 0.289 | 0.0 |
HOH |
2.767 |
O |
O |
|||
ARG | B:169 | B:169 | 67.0 | 0.298 | -55.0 | 156.0 | NA | NA | NA | ||||||||||||||
1pca | 1 | P09954 | 81.55 | 0.0 |
X-RAY |
1993-10-31 | ARG | A:154 | A:59 | 52.0 | 0.231 | -66.2 | 138.4 | 52.0 | 0.231 | 0.0 |
HOH |
2.623 |
O |
O |
|||
2v77 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-07-01 | ARG | A:59 | A:59 | 58.0 | 0.258 | -62.6 | 152.5 | 58.0 | 0.258 | 0.0 |
EPE HOH |
4.076 2.702 |
N O |
O3S O |
|||
ARG | B:59 | B:59 | 66.0 | 0.293 | -59.8 | 155.7 | NA | NA | NA | ||||||||||||||
4uee | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | ARG | A:59 | A:59 | 62.0 | 0.276 | -52.4 | 155.2 | 62.0 | 0.276 | 0.0 |
HOH |
2.721 |
O |
O |
|||
ARG | B:59 | B:59 | 65.0 | 0.289 | -57.0 | 158.6 | 65.0 | 0.289 | 0.0 |
HOH |
2.682 |
O |
O |
||||||||||
4uef | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | ARG | A:59 | A:169 | 61.0 | 0.271 | -52.1 | 154.4 | 61.0 | 0.271 | 0.0 |
HOH |
2.747 |
O |
O |
|||
ARG | B:59 | B:169 | 62.0 | 0.276 | -59.7 | 155.0 | NA | NA | NA | ||||||||||||||
4uez | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | ARG | A:59 | A:169 | 63.0 | 0.28 | -48.1 | 148.4 | 63.0 | 0.28 | 0.0 |
HOH |
2.753 |
O |
O |
|||
ARG | B:59 | B:169 | 62.0 | 0.276 | -60.5 | 155.4 | NA | NA | NA | ||||||||||||||
6i6z | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2018-12-12 | ARG | A:59 | A:169 | 63.0 | 0.28 | -54.0 | 155.3 | 63.0 | 0.28 | 0.0 |
HOH |
2.697 |
O |
O |
|||
ARG | B:59 | B:169 | 64.0 | 0.284 | -57.2 | 156.7 | 64.0 | 0.284 | 0.0 |
HOH |
2.817 |
O |
O |
||||||||||
3fju | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-12-30 | ARG | A:58 | A:59 | 61.0 | 0.271 | -60.2 | 154.1 | 61.0 | 0.271 | 0.0 |
ACT HOH |
6.666 2.706 |
N O |
CH3 O |
|||
1pyt | 2 | P00730 | 81.23 | 0.0 |
X-RAY |
1997-01-27 | ARG | B:59 | B:59 | 63.0 | 0.28 | -74.9 | 160.9 | 63.0 | 0.28 | 0.0 |
HOH |
3.491 |
CA |
O |
|||
3kgq | 1 | P00730 | 81.23 | 0.0 |
X-RAY |
2010-10-27 | ARG | A:59 | A:59 | 59.0 | 0.262 | -59.5 | 162.2 | 59.0 | 0.262 | 0.0 |
GOL HOH |
8.610 2.708 |
O O |
O3 O |
|||
1arm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1996-08-17 | ARG | A:59 | A:59 | 66.0 | 0.293 | -69.8 | 154.7 | 66.0 | 0.293 | 0.0 |
HOH |
2.779 |
O |
O |
|||
1ee3 | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | ARG | A:59 | P:59 | 65.0 | 0.289 | -65.5 | 159.7 | 65.0 | 0.289 | 0.0 |
HOH |
2.778 |
O |
O |
|||
1ell | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | ARG | A:59 | P:59 | 67.0 | 0.298 | -63.9 | 158.8 | 67.0 | 0.298 | 0.0 |
HOH |
2.749 |
O |
O |
|||
1elm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | ARG | A:59 | P:59 | 63.0 | 0.28 | -70.0 | 157.8 | 63.0 | 0.28 | 0.0 |
HOH |
2.833 |
O |
O |
|||
1yme | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1997-02-12 | ARG | A:59 | A:59 | 62.0 | 0.276 | -67.6 | 156.0 | 62.0 | 0.276 | 0.0 |
HOH |
2.675 |
O |
O |
|||
1zlh | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2005-07-05 | ARG | A:59 | A:59 | 57.0 | 0.253 | -65.9 | 138.8 | 57.0 | 0.253 | 0.0 |
HOH |
2.693 |
O |
O |
|||
2abz | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2006-01-31 | ARG | A:59 | A:59 | 62.0 | 0.276 | -58.7 | 147.9 | 62.0 | 0.276 | 0.0 | |||||||
ARG | B:59 | B:59 | 66.0 | 0.293 | -59.1 | 161.5 | 66.0 | 0.293 | 0.0 | ||||||||||||||
3hlp | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | ARG | A:59 | A:59 | 66.0 | 0.293 | -56.1 | 156.1 | 66.0 | 0.293 | 0.0 |
HOH |
2.687 |
O |
O |
|||
ARG | B:59 | B:59 | 57.0 | 0.253 | -61.2 | 156.2 | NA | NA | NA | ||||||||||||||
3huv | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | ARG | A:59 | A:59 | 61.0 | 0.271 | -48.5 | 151.1 | 61.0 | 0.271 | 0.0 |
HOH |
2.802 |
O |
O |
|||
3i1u | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2009-11-17 | ARG | A:59 | A:59 | 64.0 | 0.284 | -60.0 | 151.0 | 64.0 | 0.284 | 0.0 |
GOL HOH |
8.392 2.694 |
O O |
O3 O |
|||
1hdq | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
2001-11-15 | ARG | A:59 | A:59 | 65.0 | 0.289 | -71.0 | 159.1 | 65.0 | 0.289 | 0.0 |
HOH |
2.847 |
NH1 |
O |
|||
2ctb | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:59 | A:59 | 60.0 | 0.267 | -69.9 | 157.6 | 60.0 | 0.267 | 0.0 |
HOH |
2.697 |
O |
O |
|||
2ctc | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | ARG | A:59 | A:59 | 61.0 | 0.271 | -68.3 | 156.8 | 61.0 | 0.271 | 0.0 |
HOH |
2.701 |
O |
O |
|||
1arl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1996-08-01 | ARG | A:59 | A:59 | 59.0 | 0.262 | -70.4 | 157.4 | 59.0 | 0.262 | 0.0 |
HOH |
2.642 |
O |
O |
|||
1cpx | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1998-08-05 | ARG | A:59 | A:59 | 63.0 | 0.28 | -67.2 | 159.3 | 63.0 | 0.28 | 0.0 |
HOH |
2.777 |
NH1 |
O |
|||
1f57 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2000-09-06 | ARG | A:59 | A:59 | 69.0 | 0.307 | -63.2 | 159.3 | 69.0 | 0.307 | 0.0 |
HOH |
2.732 |
O |
O |
|||
1m4l | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2003-01-10 | ARG | A:59 | A:59 | 65.0 | 0.289 | -53.0 | 154.1 | 65.0 | 0.289 | 0.0 |
HOH |
2.808 |
O |
O |
|||
2rfh | 1 | A6H6Y4 | 81.11 | 0.0 |
X-RAY |
2008-04-22 | ARG | A:59 | A:59 | 54.0 | 0.24 | -59.7 | 146.7 | 54.0 | 0.24 | 0.0 |
HOH |
2.669 |
O |
O |
|||
3fvl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2010-01-12 | ARG | A:59 | A:59 | 65.0 | 0.289 | -69.1 | 157.4 | 65.0 | 0.289 | 0.0 |
HOH |
2.807 |
NE |
O |
|||
ARG | B:59 | C:59 | 63.0 | 0.28 | -60.8 | 167.7 | 63.0 | 0.28 | 0.0 |
HOH |
2.948 |
O |
O |
||||||||||
ARG | C:59 | E:59 | 65.0 | 0.289 | -64.2 | 151.8 | 65.0 | 0.289 | 0.0 |
HOH |
2.838 |
O |
O |
||||||||||
3fx6 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2009-08-25 | ARG | A:59 | A:59 | 65.0 | 0.289 | -69.7 | 158.0 | 65.0 | 0.289 | 0.0 |
HOH |
2.803 |
NE |
O |
|||
ARG | B:59 | C:59 | 61.0 | 0.271 | -61.1 | 159.7 | 61.0 | 0.271 | 0.0 |
HOH |
2.911 |
O |
O |
||||||||||
ARG | C:59 | E:59 | 65.0 | 0.289 | -64.4 | 152.2 | 65.0 | 0.289 | 0.0 |
HOH |
2.816 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15085-f1 | 1 | P15085 | 100.0 | 0.0 | ARG | A:169 | A:169 | 65.0 | 0.289 | -56.0 | 158.1 |