Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 130023597 | . | G | A | CCDS5820.1:NM_001868.2:c.658Gtc>Atc_NP_001859.1:p.220V>I | Homo sapiens carboxypeptidase A1 (pancreatic) (CPA1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5om9 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2017-08-09 | VAL | A:220 | A:110 | 3.0 | 0.019 | -114.3 | 94.8 | 3.0 | 0.019 | 0.0 |
HOH |
2.747 |
N |
O |
|||
VAL | B:220 | B:110 | 4.0 | 0.026 | -118.9 | 91.9 | 4.0 | 0.026 | 0.0 |
HOH |
2.950 |
N |
O |
||||||||||
4uf4 | 1 | P15085 | 99.76 | 0.0 |
X-RAY |
2016-01-20 | VAL | A:220 | A:220 | 4.0 | 0.026 | -112.0 | 95.1 | 4.0 | 0.026 | 0.0 |
HOH |
2.766 |
O |
O |
|||
VAL | B:220 | B:220 | 3.0 | 0.019 | -117.8 | 89.9 | NA | NA | NA | ||||||||||||||
1pca | 1 | P09954 | 81.55 | 0.0 |
X-RAY |
1993-10-31 | VAL | A:205 | A:110 | 3.0 | 0.019 | -112.2 | 85.3 | 3.0 | 0.019 | 0.0 |
HOH |
2.820 |
O |
O |
|||
2v77 | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-07-01 | VAL | A:110 | A:110 | 4.0 | 0.026 | -118.0 | 89.8 | 4.0 | 0.026 | 0.0 |
HOH |
2.817 |
O |
O |
|||
VAL | B:110 | B:110 | 4.0 | 0.026 | -115.0 | 88.4 | NA | NA | NA | ||||||||||||||
4uee | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | VAL | A:110 | A:110 | 3.0 | 0.019 | -110.0 | 92.6 | 3.0 | 0.019 | 0.0 |
HOH |
2.745 |
N |
O |
|||
VAL | B:110 | B:110 | 3.0 | 0.019 | -114.0 | 93.7 | 3.0 | 0.019 | 0.0 |
HOH |
2.787 |
O |
O |
||||||||||
4uef | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | VAL | A:110 | A:220 | 4.0 | 0.026 | -116.9 | 88.4 | 4.0 | 0.026 | 0.0 |
HOH |
2.865 |
O |
O |
|||
VAL | B:110 | B:220 | 4.0 | 0.026 | -116.0 | 92.8 | NA | NA | NA | ||||||||||||||
4uez | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2016-01-20 | VAL | A:110 | A:220 | 5.0 | 0.032 | -114.0 | 91.3 | 5.0 | 0.032 | 0.0 |
HOH |
2.912 |
O |
O |
|||
VAL | B:110 | B:220 | 5.0 | 0.032 | -119.0 | 91.6 | NA | NA | NA | ||||||||||||||
6i6z | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2018-12-12 | VAL | A:110 | A:220 | 5.0 | 0.032 | -116.3 | 89.2 | 5.0 | 0.032 | 0.0 |
HOH |
2.832 |
O |
O |
|||
VAL | B:110 | B:220 | 4.0 | 0.026 | -116.9 | 91.7 | 4.0 | 0.026 | 0.0 |
HOH |
2.888 |
O |
O |
||||||||||
3fju | 1 | P15085 | 100.0 | 0.0 |
X-RAY |
2008-12-30 | VAL | A:109 | A:110 | 5.0 | 0.032 | -115.9 | 90.9 | 5.0 | 0.032 | 0.0 |
HOH |
2.799 |
O |
O |
|||
1pyt | 2 | P00730 | 81.23 | 0.0 |
X-RAY |
1997-01-27 | VAL | B:110 | B:110 | 3.0 | 0.019 | -129.1 | 87.4 | 3.0 | 0.019 | 0.0 |
HOH |
2.605 |
O |
O |
|||
3kgq | 1 | P00730 | 81.23 | 0.0 |
X-RAY |
2010-10-27 | VAL | A:110 | A:110 | 1.0 | 0.006 | -123.2 | 87.0 | 1.0 | 0.006 | 0.0 |
NA HOH |
8.284 2.717 |
CG1 O |
NA O |
|||
1arm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1996-08-17 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.3 | 91.9 | 2.0 | 0.013 | 0.0 |
HOH |
2.895 |
O |
O |
|||
1ee3 | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | VAL | A:110 | P:110 | 3.0 | 0.019 | -124.2 | 87.0 | 3.0 | 0.019 | 0.0 |
HOH |
2.804 |
O |
O |
|||
1ell | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | VAL | A:110 | P:110 | 3.0 | 0.019 | -124.7 | 86.7 | 3.0 | 0.019 | 0.0 |
HOH |
2.808 |
O |
O |
|||
1elm | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2002-06-26 | VAL | A:110 | P:110 | 3.0 | 0.019 | -124.0 | 87.5 | 3.0 | 0.019 | 0.0 |
HOH |
2.856 |
O |
O |
|||
1yme | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
1997-02-12 | VAL | A:110 | A:110 | 2.0 | 0.013 | -126.2 | 91.0 | 2.0 | 0.013 | 0.0 |
HOH |
2.806 |
O |
O |
|||
1zlh | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2005-07-05 | VAL | A:110 | A:110 | 2.0 | 0.013 | -129.3 | 88.8 | 2.0 | 0.013 | 0.0 |
ZN HOH |
9.980 2.699 |
CG1 O |
ZN O |
|||
2abz | 1 | P00730 | 80.91 | 0.0 |
X-RAY |
2006-01-31 | VAL | A:110 | A:110 | 1.0 | 0.006 | -125.3 | 87.4 | 1.0 | 0.006 | 0.0 | |||||||
VAL | B:110 | B:110 | 2.0 | 0.013 | -127.1 | 91.7 | 2.0 | 0.013 | 0.0 | ||||||||||||||
3hlp | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | VAL | A:110 | A:110 | 3.0 | 0.019 | -120.3 | 82.7 | 3.0 | 0.019 | 0.0 |
HOH |
2.824 |
O |
O |
|||
VAL | B:110 | B:110 | 2.0 | 0.013 | -124.5 | 85.1 | NA | NA | NA | ||||||||||||||
3huv | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2010-06-02 | VAL | A:110 | A:110 | 1.0 | 0.006 | -128.6 | 88.5 | 1.0 | 0.006 | 0.0 |
HOH |
2.796 |
O |
O |
|||
3i1u | 1 | A6H6Y4 | 80.91 | 0.0 |
X-RAY |
2009-11-17 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.2 | 86.3 | 2.0 | 0.013 | 0.0 |
HOH |
2.794 |
O |
O |
|||
1hdq | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
2001-11-15 | VAL | A:110 | A:110 | 2.0 | 0.013 | -122.5 | 84.0 | 2.0 | 0.013 | 0.0 |
HOH |
2.795 |
O |
O |
|||
2ctb | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | VAL | A:110 | A:110 | 2.0 | 0.013 | -123.8 | 88.9 | 2.0 | 0.013 | 0.0 |
HOH |
2.825 |
O |
O |
|||
2ctc | 1 | P00730 | 81.43 | 0.0 |
X-RAY |
1994-01-31 | VAL | A:110 | A:110 | 2.0 | 0.013 | -126.7 | 88.1 | 2.0 | 0.013 | 0.0 |
HOH |
2.808 |
O |
O |
|||
1arl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1996-08-01 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.1 | 90.7 | 2.0 | 0.013 | 0.0 |
HOH |
2.747 |
N |
O |
|||
1cpx | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
1998-08-05 | VAL | A:110 | A:110 | 2.0 | 0.013 | -121.0 | 91.1 | 2.0 | 0.013 | 0.0 |
HOH |
2.851 |
O |
O |
|||
1f57 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2000-09-06 | VAL | A:110 | A:110 | 2.0 | 0.013 | -122.4 | 88.5 | 2.0 | 0.013 | 0.0 |
HOH |
2.791 |
O |
O |
|||
1m4l | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2003-01-10 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.2 | 87.8 | 2.0 | 0.013 | 0.0 |
HOH |
2.848 |
O |
O |
|||
2rfh | 1 | A6H6Y4 | 81.11 | 0.0 |
X-RAY |
2008-04-22 | VAL | A:110 | A:110 | 2.0 | 0.013 | -124.1 | 83.9 | 2.0 | 0.013 | 0.0 |
HOH |
2.852 |
O |
O |
|||
3fvl | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2010-01-12 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.3 | 85.6 | 2.0 | 0.013 | 0.0 |
HOH |
2.690 |
O |
O |
|||
VAL | B:110 | C:110 | 2.0 | 0.013 | -126.8 | 82.5 | 2.0 | 0.013 | 0.0 |
HOH |
2.750 |
O |
O |
||||||||||
VAL | C:110 | E:110 | 2.0 | 0.013 | -125.0 | 86.0 | 2.0 | 0.013 | 0.0 |
HOH |
2.782 |
O |
O |
||||||||||
3fx6 | 1 | P00730 | 81.11 | 0.0 |
X-RAY |
2009-08-25 | VAL | A:110 | A:110 | 2.0 | 0.013 | -125.1 | 86.4 | 2.0 | 0.013 | 0.0 |
HOH |
2.671 |
O |
O |
|||
VAL | B:110 | C:110 | 2.0 | 0.013 | -127.1 | 83.5 | 2.0 | 0.013 | 0.0 |
HOH |
2.726 |
O |
O |
||||||||||
VAL | C:110 | E:110 | 2.0 | 0.013 | -125.7 | 85.7 | 2.0 | 0.013 | 0.0 |
HOH |
2.778 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15085-f1 | 1 | P15085 | 100.0 | 0.0 | VAL | A:220 | A:220 | 6.0 | 0.039 | -130.4 | 84.4 |