Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 141443394 . G A CCDS5866.1:NM_001256510.1:c.119gGt>gAt_NP_001243439.1:p.40G>D Homo sapiens single stranded DNA binding protein 1 (SSBP1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rup 1 Q04837 100.0 9e-97 X-RAY
 2019-10-09 GLY A:32 A:40 14.0 0.187 -85.8 -25.1 14.0 0.187 0.0 HOH
 4.424
 CA
 O
GLY B:32 B:40 18.0 0.24 -76.4 -42.7 18.0 0.24 0.0 HOH
 4.935
 O
 O
2dud 1 Q04837 100.0 1e-96 X-RAY
 2007-01-21 GLY A:25 A:24 28.0 0.373 -83.7 -44.7 28.0 0.373 0.0
GLY B:25 B:24 7.0 0.093 -54.6 -51.0 7.0 0.093 0.0
1s3o 1 Q04837 100.0 2e-95 X-RAY
 2004-06-22 GLY A:24 A:24 24.0 0.32 -93.4 -11.8 24.0 0.32 0.0
GLY B:24 B:24 14.0 0.187 -101.6 -22.6 14.0 0.187 0.0 HOH
 8.486
 O
 O
3ull 1 Q04837 100.0 2e-95 X-RAY
 1997-10-15 GLY A:24 A:24 23.0 0.307 -89.4 -31.4 23.0 0.307 0.0 HOH
 3.767
 CA
 O
GLY B:24 B:24 22.0 0.293 -91.9 -23.8 22.0 0.293 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q04837-f1 1 Q04837 100.0 1e-108 GLY A:40 A:40 21.0 0.28 -81.2 -32.2