Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 141445301 . G A CCDS5866.1:NM_001256510.1:c.320cGa>cAa_NP_001243439.1:p.107R>Q Homo sapiens single stranded DNA binding protein 1 (SSBP1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rup 1 Q04837 100.0 9e-97 X-RAY
 2019-10-09 ARG A:99 A:107 122.0 0.542 E -92.0 123.0 18.0 0.08 0.462 B:Q04837:0.271
B:Q04837:0.227
 HOH
 2.798
 O
 O
ARG B:99 B:107 117.0 0.52 E -96.0 129.3 14.0 0.062 0.458 A:Q04837:0.258
A:Q04837:0.231
 HOH
 3.006
 NE
 O
2dud 1 Q04837 100.0 1e-96 X-RAY
 2007-01-21 ARG A:92 A:91 130.0 0.578 E -91.3 130.2 92.0 0.409 0.169 B:Q04837:0.169
ARG B:92 B:91 129.0 0.573 E -111.9 114.9 81.0 0.36 0.213 A:Q04837:0.213
1s3o 1 Q04837 100.0 2e-95 X-RAY
 2004-06-22 ARG A:91 A:91 117.0 0.52 E -84.0 138.6 69.0 0.307 0.213 B:Q04837:0.213
 HOH
 6.359
 NH2
 O
ARG B:91 B:91 119.0 0.529 E -91.1 134.2 47.0 0.209 0.32 A:Q04837:0.32
 HOH
 8.088
 NH2
 O
3ull 1 Q04837 100.0 2e-95 X-RAY
 1997-10-15 ARG A:91 A:91 134.0 0.596 E -78.9 133.1 34.0 0.151 0.445 B:Q04837:0.262
B:Q04837:0.227
 HOH
 3.649
 NH2
 O
ARG B:91 B:91 123.0 0.547 E -91.4 127.0 9.0 0.04 0.507 A:Q04837:0.316
A:Q04837:0.302
 HOH
 3.192
 CD
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q04837-f1 1 Q04837 100.0 1e-108 ARG A:107 A:107 88.0 0.391 E -85.4 121.9