Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 30536729 . C A CCDS5428.1:NM_024051.3:c.546aaG>aaT_NP_076956.1:p.182K>N Homo sapiens gamma-glutamylcyclotransferase (GGCT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2pn7 1 O75223 100.0 1e-141 X-RAY
 2007-05-01 LYS A:182 A:182 177.0 0.885 -106.5 360.0 177.0 0.885 0.0
LYS B:182 B:182 138.0 0.69 H -64.4 -48.0 138.0 0.69 0.0 HOH
 7.917
 CD
 O
3cry 1 O75223 99.47 3e-141 X-RAY
 2008-04-29 LYS A:182 A:182 154.0 0.77 -78.5 360.0 154.0 0.77 0.0 HOH
 4.365
 CE
 O
LYS B:182 B:182 139.0 0.695 H -56.0 -15.6 139.0 0.695 0.0 HOH
 4.471
 NZ
 O
2rbh 1 O75223 99.47 6e-141 X-RAY
 2007-10-02 LYS A:182 A:182 169.0 0.845 -83.5 360.0 169.0 0.845 0.0 HOH
 5.854
 NZ
 O
LYS B:182 B:182 144.0 0.72 H -65.0 -22.9 144.0 0.72 0.0 HOH
 8.784
 NZ
 O
2i5t 1 O75223 100.0 7e-141 X-RAY
 2006-09-12 LYS A:182 A:182 191.0 0.955 -84.1 360.0 191.0 0.955 0.0 HOH
 9.637
 CD
 O
LYS B:182 B:182 142.0 0.71 H -56.9 -39.8 NA NA NA
2q53 1 O75223 100.0 7e-141 X-RAY
 2007-06-19 LYS A:182 A:182 181.0 0.905 -58.8 360.0 181.0 0.905 0.0 HOH
 9.250
 CD
 O
LYS B:182 B:182 130.0 0.65 T -101.9 -2.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o75223-f1 1 O75223 100.0 4e-142 LYS A:182 A:182 110.0 0.55 H -61.7 -44.9