Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 39736343 . A C CCDS5460.1:NM_005402.3:c.383aAa>aCa_NP_005393.2:p.128K>T Homo sapiens RAS like proto-oncogene A (RALA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2bov 1 P11233 100.0 6e-153 X-RAY
 2005-04-15 LYS A:128 A:128 60.0 0.3 73.0 38.5 60.0 0.3 0.0 GDP
HOH
 3.313
2.587
 NZ
NZ
 O4'
O
6p0i 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 60.0 0.3 71.8 39.3 60.0 0.3 0.0 GDP
CA
HOH
 2.597
9.757
1.952
 HA
HZ1
HZ2
 O6
CA
O
6p0j 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 61.0 0.305 75.8 37.9 61.0 0.305 0.0 GDP
HOH
 2.657
2.817
 HA
NZ
 O6
O
6p0k 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 60.0 0.3 73.9 37.1 60.0 0.3 0.0 CA
GDP
HOH
 9.722
2.604
2.019
 HZ1
HA
HZ2
 CA
O6
O
6p0l 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 61.0 0.305 73.4 37.9 61.0 0.305 0.0 CA
GDP
HOH
 9.779
2.594
2.023
 HZ1
HA
HZ3
 CA
O6
O
6p0m 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 61.0 0.305 73.7 38.8 61.0 0.305 0.0 CA
GDP
HOH
 9.766
2.581
1.972
 HZ1
HA
HZ3
 CA
O6
O
6p0n 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 61.0 0.305 71.0 38.5 61.0 0.305 0.0 CA
CL
GDP
HOH
 9.816
2.162
2.572
2.042
 HZ1
HZ3
HA
HZ2
 CA
CL
O6
O
6p0o 1 P11233 100.0 8e-132 X-RAY
 2020-03-04 LYS A:128 B:128 63.0 0.315 73.6 38.0 63.0 0.315 0.0 GDP
CA
HOH
 2.602
9.847
2.061
 HA
HZ1
HZ2
 O6
CA
O
1uad 1 P11233 100.0 3e-128 X-RAY
 2003-07-15 LYS A:120 A:128 58.0 0.29 75.6 35.4 58.0 0.29 0.0 GNP
HOH
 3.233
2.611
 CA
NZ
 O6
O
LYS B:120 B:128 59.0 0.295 75.0 34.3 NA NA NA
2a78 1 P11233 100.0 5e-128 X-RAY
 2005-10-11 LYS A:132 A:128 58.0 0.29 70.6 44.5 58.0 0.29 0.0 GDP
HOH
 3.002
2.758
 NZ
NZ
 O4'
O
2a9k 1 P11233 100.0 5e-128 X-RAY
 2005-10-11 LYS A:132 A:128 61.0 0.305 71.4 41.1 61.0 0.305 0.0 GDP
HOH
 3.036
2.796
 NZ
NZ
 O4'
O
1zc3 1 P11233 99.43 4e-127 X-RAY
 2005-06-14 LYS A:120 A:128 62.0 0.31 70.6 38.3 62.0 0.31 0.0 GNP
HOH
 3.223
2.692
 CA
NZ
 O6
O
LYS C:120 C:128 61.0 0.305 72.5 34.8 NA NA NA
1zc4 1 P11233 99.43 4e-127 X-RAY
 2005-06-14 LYS A:120 A:128 62.0 0.31 65.3 40.3 62.0 0.31 0.0 GNP
HOH
 3.199
6.732
 NZ
C
 O4'
O
LYS C:120 C:128 62.0 0.31 69.8 43.4 NA NA NA
1u8y 1 P63320 99.4 3e-122 X-RAY
 2004-11-23 LYS A:118 A:128 62.0 0.31 71.6 38.5 62.0 0.31 0.0 MG
GNP
HOH
 7.615
3.191
2.711
 O
NZ
NZ
 MG
O4'
O
LYS B:118 B:128 64.0 0.32 73.4 38.4 NA NA NA
1u8z 1 P63320 99.4 3e-122 X-RAY
 2004-11-23 LYS A:118 A:128 63.0 0.315 73.7 35.7 63.0 0.315 0.0 GDP
HOH
 3.209
2.855
 NZ
NZ
 O4'
O
LYS B:118 B:128 60.0 0.3 72.7 36.8 NA NA NA
1u90 1 P63320 99.4 3e-122 X-RAY
 2004-11-23 LYS A:118 A:128 61.0 0.305 76.7 35.9 61.0 0.305 0.0 GDP
HOH
 3.042
2.822
 NZ
NZ
 O4'
O
LYS B:118 B:128 61.0 0.305 75.5 38.7 NA NA NA
6zqt 1 P11234 84.86 4e-114 X-RAY
 2020-11-25 LYS A:129 A:129 63.0 0.315 71.5 37.4 63.0 0.315 0.0 GNP
HOH
 3.128
2.787
 NZ
NZ
 O4'
O
LYS C:129 B:129 60.0 0.3 73.7 37.5 NA NA NA
6zrn 1 P11234 84.86 4e-114 X-RAY
 2020-11-25 LYS A:129 A:129 60.0 0.3 75.5 36.9 60.0 0.3 0.0 GNP
HOH
 3.144
2.823
 NZ
NZ
 O4'
O
LYS B:129 B:129 59.0 0.295 73.2 34.1 NA NA NA
2kwi 1 P11234 84.83 9e-110 NMR
 2010-09-01 LYS A:122 A:129 76.0 0.38 77.1 42.1 76.0 0.38 0.0 GNP
 2.128
 HD2
 HN1

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11233-f1 1 P11233 100.0 3e-153 LYS A:128 A:128 43.0 0.215 67.8 35.1
af-p11234-f1 1 P11234 81.16 6e-117 LYS A:129 A:129 49.0 0.245 70.0 35.2