Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 39736432 | . | G | A | CCDS5460.1:NM_005402.3:c.472Gct>Act_NP_005393.2:p.158A>T | Homo sapiens RAS like proto-oncogene A (RALA), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2bov | 1 | P11233 | 100.0 | 6e-153 |
X-RAY |
2005-04-15 | ALA | A:158 | A:158 | 2.0 | 0.017 | T | -61.6 | -18.7 | 2.0 | 0.017 | 0.0 |
GDP HOH |
2.666 4.570 |
N O |
O6 O |
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6p0i | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 3.0 | 0.026 | T | -66.5 | -20.7 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.213 3.936 |
H HB1 |
O6 O |
||
6p0j | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 2.0 | 0.017 | T | -65.4 | -22.1 | 2.0 | 0.017 | 0.0 |
GDP HOH |
2.251 4.039 |
H HB1 |
O6 O |
||
6p0k | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 3.0 | 0.026 | T | -64.9 | -20.3 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.212 3.933 |
H HB1 |
O6 O |
||
6p0l | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 3.0 | 0.026 | T | -65.0 | -21.7 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.242 3.924 |
H HB1 |
O6 O |
||
6p0m | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 3.0 | 0.026 | T | -66.3 | -24.2 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.257 3.911 |
H HB1 |
O6 O |
||
6p0n | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 3.0 | 0.026 | T | -64.3 | -20.8 | 3.0 | 0.026 | 0.0 |
CL GDP HOH |
8.280 2.262 3.889 |
HB3 H HB1 |
CL O6 O |
||
6p0o | 1 | P11233 | 100.0 | 8e-132 |
X-RAY |
2020-03-04 | ALA | A:158 | B:158 | 2.0 | 0.017 | T | -64.3 | -21.6 | 2.0 | 0.017 | 0.0 |
GDP HOH |
2.279 4.017 |
H HB1 |
O6 O |
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1uad | 1 | P11233 | 100.0 | 3e-128 |
X-RAY |
2003-07-15 | ALA | A:150 | A:158 | 3.0 | 0.026 | T | -66.7 | -20.9 | 3.0 | 0.026 | 0.0 |
GNP HOH |
2.789 4.484 |
N O |
O6 O |
||
ALA | B:150 | B:158 | 3.0 | 0.026 | T | -67.4 | -18.0 | NA | NA | NA | |||||||||||||
2a78 | 1 | P11233 | 100.0 | 5e-128 |
X-RAY |
2005-10-11 | ALA | A:162 | A:158 | 2.0 | 0.017 | T | -67.5 | -20.0 | 2.0 | 0.017 | 0.0 |
GDP HOH |
2.818 4.630 |
N O |
O6 O |
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2a9k | 1 | P11233 | 100.0 | 5e-128 |
X-RAY |
2005-10-11 | ALA | A:162 | A:158 | 2.0 | 0.017 | T | -68.6 | -19.2 | 2.0 | 0.017 | 0.0 |
GDP HOH |
2.994 4.773 |
N O |
O6 O |
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1zc3 | 1 | P11233 | 99.43 | 4e-127 |
X-RAY |
2005-06-14 | ALA | A:150 | A:158 | 2.0 | 0.017 | T | -62.1 | -23.5 | 2.0 | 0.017 | 0.0 |
GNP HOH |
2.930 4.483 |
N O |
O6 O |
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ALA | C:150 | C:158 | 2.0 | 0.017 | T | -66.9 | -21.7 | NA | NA | NA | |||||||||||||
1zc4 | 1 | P11233 | 99.43 | 4e-127 |
X-RAY |
2005-06-14 | ALA | A:150 | A:158 | 2.0 | 0.017 | T | -64.0 | -11.8 | 2.0 | 0.017 | 0.0 |
GNP HOH |
2.943 4.496 |
N O |
O6 O |
||
ALA | C:150 | C:158 | 3.0 | 0.026 | T | -64.1 | -25.1 | NA | NA | NA | |||||||||||||
1u8y | 1 | P63320 | 99.4 | 3e-122 |
X-RAY |
2004-11-23 | ALA | A:148 | A:158 | 3.0 | 0.026 | T | -65.3 | -28.3 | 3.0 | 0.026 | 0.0 |
GNP HOH |
2.806 4.193 |
N CB |
O6 O |
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ALA | B:148 | B:158 | 3.0 | 0.026 | T | -68.1 | -29.6 | NA | NA | NA | |||||||||||||
1u8z | 1 | P63320 | 99.4 | 3e-122 |
X-RAY |
2004-11-23 | ALA | A:148 | A:158 | 3.0 | 0.026 | T | -67.6 | -20.2 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.757 4.912 |
N O |
O6 O |
||
ALA | B:148 | B:158 | 3.0 | 0.026 | T | -69.6 | -19.2 | NA | NA | NA | |||||||||||||
1u90 | 1 | P63320 | 99.4 | 3e-122 |
X-RAY |
2004-11-23 | ALA | A:148 | A:158 | 3.0 | 0.026 | T | -69.7 | -16.4 | 3.0 | 0.026 | 0.0 |
GDP HOH |
2.654 4.701 |
N O |
O6 O |
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ALA | B:148 | B:158 | 3.0 | 0.026 | T | -72.3 | -14.3 | NA | NA | NA | |||||||||||||
6zqt | 1 | P11234 | 84.86 | 4e-114 |
X-RAY |
2020-11-25 | ALA | A:159 | A:159 | 2.0 | 0.017 | T | -63.4 | -21.2 | 2.0 | 0.017 | 0.0 |
GNP HOH |
2.770 4.483 |
N O |
O6 O |
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ALA | C:159 | B:159 | 2.0 | 0.017 | T | -60.8 | -25.0 | NA | NA | NA | |||||||||||||
6zrn | 1 | P11234 | 84.86 | 4e-114 |
X-RAY |
2020-11-25 | ALA | A:159 | A:159 | 2.0 | 0.017 | T | -63.2 | -25.4 | 2.0 | 0.017 | 0.0 |
GNP HOH |
2.828 4.645 |
N O |
O6 O |
||
ALA | B:159 | B:159 | 2.0 | 0.017 | T | -60.0 | -25.4 | NA | NA | NA | |||||||||||||
2kwi | 1 | P11234 | 84.83 | 9e-110 |
NMR |
2010-09-01 | ALA | A:152 | A:159 | 5.0 | 0.043 | T | -86.0 | -7.0 | 5.0 | 0.043 | 0.0 |
GNP HOH |
1.979 9.930 |
H HB1 |
HN21 H2 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p11233-f1 | 1 | P11233 | 100.0 | 3e-153 | ALA | A:158 | A:158 | 2.0 | 0.017 | T | -57.8 | -35.1 | |
af-p11234-f1 | 1 | P11234 | 81.16 | 6e-117 | ALA | A:159 | A:159 | 2.0 | 0.017 | T | -58.6 | -30.3 |