Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 55229273 . G A CCDS5514.1:NM_005228.3:c.1580cGg>cAg_NP_005219.2:p.527R>Q Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7syd 1 P00533 99.92 0.0 EM
2021-12-22 ARG A:527 A:503 143.0 0.636 S -95.0 -29.0 143.0 0.636 0.0
ARG C:527 B:503 140.0 0.622 S -79.0 -53.7 140.0 0.622 0.0
7sye 1 P00533 99.92 0.0 EM
2021-12-22 ARG A:527 A:503 118.0 0.524 S -82.5 -51.7 118.0 0.524 0.0
ARG B:527 B:503 102.0 0.453 S 23.3 -127.2 102.0 0.453 0.0
7sz5 1 P00533 99.92 0.0 EM
2021-12-22 ARG A:527 A:503 150.0 0.667 S -60.7 -65.7 150.0 0.667 0.0
ARG C:527 NA:NA DO NA DO DO DO NA NA NA
7sz7 1 P00533 99.92 0.0 EM
2021-12-15 ARG A:527 A:503 151.0 0.671 S -62.0 -44.8 151.0 0.671 0.0
ARG C:527 B:503 84.0 0.373 -98.3 165.9 84.0 0.373 0.0
7sz0 1 P00533 99.83 0.0 EM
2021-12-22 ARG A:527 A:503 142.0 0.631 S -76.6 -33.2 142.0 0.631 0.0
ARG C:527 B:503 140.0 0.622 S -69.2 -45.0 140.0 0.622 0.0
7sz1 1 P00533 99.83 0.0 EM
2021-12-22 ARG A:527 A:503 210.0 0.933 S -92.6 -8.1 210.0 0.933 0.0
ARG C:527 B:503 88.0 0.391 S -27.4 -63.4 88.0 0.391 0.0
5xwd 1 P00533 99.84 0.0 X-RAY
2018-02-28 ARG A:527 A:503 143.0 0.636 S -74.8 -17.0 143.0 0.636 0.0 NAG
6.760
O
C1
3qwq 1 P00533 100.0 0.0 X-RAY
2012-02-01 ARG A:527 A:503 136.0 0.604 S -80.9 -20.1 136.0 0.604 0.0 NAG
NAG
FUC
3.799
7.198
3.790
CD
CD
CD
O6
C8
C5
1ivo 1 P00533 100.0 0.0 X-RAY
2002-10-16 ARG A:503 A:503 183.0 0.813 S -89.0 120.3 183.0 0.813 0.0 HOH
5.934
O
O
ARG B:503 B:503 178.0 0.791 S -141.1 124.0 178.0 0.791 0.0 HOH
5.473
O
O
4uv7 1 P00533 100.0 0.0 X-RAY
2015-10-14 ARG A:503 A:503 172.0 0.764 S -56.2 -53.1 172.0 0.764 0.0 NAG
HOH
5.372
2.983
O
NH2
O7
O
3b2v 3 P00533 100.0 0.0 X-RAY
2008-02-19 ARG C:503 A:503 49.0 NA S -52.6 -42.0 49.0 NA NA NAG
4.108
O
C8
4kro 1 P00533 100.0 0.0 X-RAY
2013-08-28 ARG A:503 A:503 116.0 0.516 S -64.8 -56.3 116.0 0.516 0.0
1nql 1 4885199 99.84 0.0 X-RAY
2003-03-11 ARG A:503 A:503 130.0 0.578 S -68.9 -47.0 130.0 0.578 0.0 NAG
3.499
NE
O5
4krp 1 P00533 99.84 0.0 X-RAY
2013-08-28 ARG A:503 A:503 135.0 0.6 S -78.8 -33.8 135.0 0.6 0.0 NAG
2.681
HD2
H5
1yy9 1 P00533 99.51 0.0 X-RAY
2005-04-26 ARG A:503 A:503 64.0 NA S -81.8 -22.2 64.0 NA NA NAG
HOH
2.902
8.663
CB
CB
O7
O
6aru 1 P00533 99.68 0.0 X-RAY
2018-08-29 ARG A:503 A:503 134.0 0.596 S -81.3 -21.1 134.0 0.596 0.0
3njp 1 P00533 99.84 0.0 X-RAY
2010-10-13 ARG A:503 A:503 147.0 0.653 S -68.0 -68.9 147.0 0.653 0.0 NAG
5.817
C
C1
ARG B:503 B:503 145.0 0.644 S -78.9 -53.7 145.0 0.644 0.0 NAG
3.280
O
O7
4uip 1 P00533 100.0 0.0 X-RAY
2015-11-25 ARG A:502 A:503 123.0 0.547 S -69.5 -43.1 116.0 0.516 0.031 B:E0ACT6+Q4G1L3:0.031
NAG
HOH
3.663
6.987
CG
CA
O5
O
3p0y 1 P00533 99.52 3e-141 X-RAY
2011-10-26 ARG A:194 A:503 220.0 0.978 -90.9 360.0 220.0 0.978 0.0 HOH
3.010
NH1
O
3b2u 3 P00533 99.51 2e-140 X-RAY
2008-02-19 ARG C:197 NA:NA DO NA DO DO DO NA NA NA
ARG F:197 NA:NA DO NA DO DO DO NA NA NA
ARG I:197 NA:NA DO NA DO DO DO NA NA NA
ARG L:197 NA:NA DO NA DO DO DO NA NA NA
ARG O:197 NA:NA DO NA DO DO DO NA NA NA
ARG R:197 NA:NA DO NA DO DO DO NA NA NA
ARG U:197 NA:NA DO NA DO DO DO NA NA NA
ARG X:197 NA:NA DO NA DO DO DO NA NA NA
3c09 3 P00533 99.51 2e-140 X-RAY
2008-04-15 ARG C:197 NA:NA DO NA DO DO DO NA NA NA
ARG F:197 NA:NA DO NA DO DO DO NA NA NA
4krl 2 P00533 99.51 2e-140 X-RAY
2013-08-28 ARG B:197 A:503 76.0 NA S -80.9 -34.3 76.0 NA NA MES
HOH
3.122
2.876
O
O
O2S
O
4krm 1 P00533 99.51 2e-140 X-RAY
2013-08-28 ARG A:197 A:503 110.0 NA -65.3 360.0 110.0 NA NA
ARG C:197 C:503 209.0 0.929 -111.1 360.0 NA NA NA
ARG E:197 E:503 116.0 NA -93.3 360.0 NA NA NA
ARG G:197 G:503 141.0 NA -135.4 360.0 NA NA NA
ARG I:197 NA:NA DO NA DO DO DO NA NA NA
ARG K:197 NA:NA DO NA DO DO DO NA NA NA
6b3s 1 P00533 99.02 1e-139 X-RAY
2017-12-06 ARG A:197 NA:NA DO NA DO DO DO NA NA NA
ARG D:197 NA:NA DO NA DO DO DO NA NA NA
ARG G:197 NA:NA DO NA DO DO DO NA NA NA
ARG J:197 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00533-f1 1 P00533 100.0 0.0 ARG A:527 A:527 180.0 0.8 S -75.8 -35.8