Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 55233030 . A C CCDS5514.1:NM_005228.3:c.1780Acc>Ccc_NP_005219.2:p.594T>P Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7syd 1 P00533 99.92 0.0 EM
 2021-12-22 THR A:594 A:570 95.0 0.679 S -135.4 128.9 95.0 0.679 0.0
THR C:594 B:570 94.0 0.671 S -144.1 129.2 94.0 0.671 0.0
7sye 1 P00533 99.92 0.0 EM
 2021-12-22 THR A:594 A:570 67.0 0.479 S -105.8 177.7 67.0 0.479 0.0
THR B:594 B:570 93.0 0.664 S -144.4 132.0 93.0 0.664 0.0
7sz5 1 P00533 99.92 0.0 EM
 2021-12-22 THR A:594 A:570 49.0 0.35 S -143.3 146.7 49.0 0.35 0.0
THR C:594 NA:NA DO NA DO DO DO NA NA NA
7sz7 1 P00533 99.92 0.0 EM
 2021-12-15 THR A:594 A:570 65.0 0.464 S -143.0 138.2 65.0 0.464 0.0
THR C:594 B:570 93.0 0.664 S -148.3 127.5 93.0 0.664 0.0
7sz0 1 P00533 99.83 0.0 EM
 2021-12-22 THR A:594 A:570 115.0 0.821 S -149.6 117.1 115.0 0.821 0.0
THR C:594 B:570 94.0 0.671 S -144.1 128.7 94.0 0.671 0.0
7sz1 1 P00533 99.83 0.0 EM
 2021-12-22 THR A:594 A:570 89.0 0.636 S -144.0 118.9 89.0 0.636 0.0
THR C:594 B:570 94.0 0.671 S -144.1 129.2 89.0 0.636 0.035 A:P00533:0.036
5xwd 1 P00533 99.84 0.0 X-RAY
 2018-02-28 THR A:594 A:570 102.0 0.729 S -138.0 151.0 102.0 0.729 0.0
3qwq 1 P00533 100.0 0.0 X-RAY
 2012-02-01 THR A:594 A:570 96.0 0.686 S -151.9 150.8 96.0 0.686 0.0
1ivo 1 P00533 100.0 0.0 X-RAY
 2002-10-16 THR A:570 NA:NA DO NA DO DO DO NA NA NA
THR B:570 NA:NA DO NA DO DO DO NA NA NA
4uv7 1 P00533 100.0 0.0 X-RAY
 2015-10-14 THR A:570 A:570 97.0 0.693 S -139.9 163.2 97.0 0.693 0.0 HOH
 5.102
 OG1
 O
3b2v 3 P00533 100.0 0.0 X-RAY
 2008-02-19 THR C:570 A:570 120.0 0.857 S -139.1 120.4 120.0 0.857 0.0
4kro 1 P00533 100.0 0.0 X-RAY
 2013-08-28 THR A:570 A:570 70.0 NA S -153.2 139.2 70.0 NA NA
1nql 1 4885199 99.84 0.0 X-RAY
 2003-03-11 THR A:570 A:570 94.0 0.671 S -144.8 152.1 94.0 0.671 0.0
4krp 1 P00533 99.84 0.0 X-RAY
 2013-08-28 THR A:570 A:570 64.0 NA S -162.6 133.9 64.0 NA NA
1yy9 1 P00533 99.51 0.0 X-RAY
 2005-04-26 THR A:570 A:570 95.0 0.679 S -135.3 162.2 95.0 0.679 0.0 HOH
 3.034
 O
 O
6aru 1 P00533 99.68 0.0 X-RAY
 2018-08-29 THR A:570 A:570 104.0 0.743 S -153.2 152.5 104.0 0.743 0.0
3njp 1 P00533 99.84 0.0 X-RAY
 2010-10-13 THR A:570 A:570 93.0 0.664 S -141.5 135.3 88.0 0.629 0.035 B:P00533:0.036
THR B:570 B:570 91.0 0.65 S -144.1 132.9 91.0 0.65 0.0
4uip 1 P00533 100.0 0.0 X-RAY
 2015-11-25 THR A:569 A:570 112.0 0.8 S -133.1 140.8 112.0 0.8 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00533-f1 1 P00533 100.0 0.0 THR A:594 A:594 100.0 0.714 S -152.1 146.2