Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr7 | 55233042 | . | G | A | CCDS5514.1:NM_005228.3:c.1792Gga>Aga_NP_005219.2:p.598G>R | Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7syd | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | GLY | A:598 | A:574 | 22.0 | 0.293 | S | 122.0 | 26.8 | 22.0 | 0.293 | 0.0 | ||||||
GLY | C:598 | B:574 | 45.0 | 0.6 | S | 144.4 | 14.4 | 26.0 | 0.347 | 0.253 |
A:P00533:0.253 |
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7sye | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | GLY | A:598 | A:574 | 24.0 | 0.32 | E | 120.6 | 37.5 | 24.0 | 0.32 | 0.0 | ||||||
GLY | B:598 | B:574 | 45.0 | 0.6 | S | 144.4 | 14.4 | 45.0 | 0.6 | 0.0 | |||||||||||||
7sz5 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-22 | GLY | A:598 | A:574 | 34.0 | 0.453 | E | 145.8 | -0.2 | 34.0 | 0.453 | 0.0 | ||||||
GLY | C:598 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7sz7 | 1 | P00533 | 99.92 | 0.0 |
EM |
2021-12-15 | GLY | A:598 | A:574 | 34.0 | 0.453 | E | 122.6 | 26.8 | 22.0 | 0.293 | 0.16 |
C:P00533:0.16 |
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GLY | C:598 | B:574 | 44.0 | 0.587 | S | 144.4 | 14.4 | 39.0 | 0.52 | 0.067 |
A:P00533:0.067 |
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7sz0 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | GLY | A:598 | A:574 | 31.0 | 0.413 | E | 144.3 | 2.1 | 31.0 | 0.413 | 0.0 | ||||||
GLY | C:598 | B:574 | 44.0 | 0.587 | S | 136.9 | 14.4 | 44.0 | 0.587 | 0.0 | |||||||||||||
7sz1 | 1 | P00533 | 99.83 | 0.0 |
EM |
2021-12-22 | GLY | A:598 | A:574 | 25.0 | 0.333 | E | 117.5 | 31.2 | 25.0 | 0.333 | 0.0 | ||||||
GLY | C:598 | B:574 | 45.0 | 0.6 | S | 144.4 | 14.4 | 45.0 | 0.6 | 0.0 | |||||||||||||
5xwd | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2018-02-28 | GLY | A:598 | A:574 | 29.0 | 0.387 | E | 95.5 | 13.0 | 29.0 | 0.387 | 0.0 | ||||||
3qwq | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2012-02-01 | GLY | A:598 | A:574 | 30.0 | 0.4 | E | 91.2 | 6.0 | 30.0 | 0.4 | 0.0 | ||||||
1ivo | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2002-10-16 | GLY | A:574 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLY | B:574 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4uv7 | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-10-14 | GLY | A:574 | A:574 | 25.0 | 0.333 | E | 109.5 | -1.0 | 25.0 | 0.333 | 0.0 |
HOH |
4.717 |
N |
O |
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3b2v | 3 | P00533 | 100.0 | 0.0 |
X-RAY |
2008-02-19 | GLY | C:574 | A:574 | 54.0 | 0.72 | S | -50.9 | 91.9 | 54.0 | 0.72 | 0.0 | ||||||
4kro | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2013-08-28 | GLY | A:574 | A:574 | 46.0 | 0.613 | S | 129.4 | -15.5 | 46.0 | 0.613 | 0.0 | ||||||
1nql | 1 | 4885199 | 99.84 | 0.0 |
X-RAY |
2003-03-11 | GLY | A:574 | A:574 | 26.0 | 0.347 | E | 76.1 | 43.8 | 26.0 | 0.347 | 0.0 |
NAG |
8.190 |
O |
O3 |
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4krp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2013-08-28 | GLY | A:574 | A:574 | 39.0 | 0.52 | S | 125.3 | -19.3 | 39.0 | 0.52 | 0.0 | ||||||
1yy9 | 1 | P00533 | 99.51 | 0.0 |
X-RAY |
2005-04-26 | GLY | A:574 | A:574 | 25.0 | 0.333 | E | 83.3 | 25.4 | 25.0 | 0.333 | 0.0 |
HOH |
8.601 |
N |
O |
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6aru | 1 | P00533 | 99.68 | 0.0 |
X-RAY |
2018-08-29 | GLY | A:574 | A:574 | 28.0 | 0.373 | E | 90.3 | 6.4 | 28.0 | 0.373 | 0.0 | ||||||
3njp | 1 | P00533 | 99.84 | 0.0 |
X-RAY |
2010-10-13 | GLY | A:574 | A:574 | 43.0 | 0.573 | E | 143.9 | 2.1 | 28.0 | 0.373 | 0.2 |
B:P00533:0.2 |
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GLY | B:574 | B:574 | 46.0 | 0.613 | S | 144.4 | 14.4 | 14.0 | 0.187 | 0.426 |
A:P00533:0.427 |
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4uip | 1 | P00533 | 100.0 | 0.0 |
X-RAY |
2015-11-25 | GLY | A:573 | A:574 | 32.0 | 0.427 | E | 114.8 | 14.4 | 32.0 | 0.427 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00533-f1 | 1 | P00533 | 100.0 | 0.0 | GLY | A:598 | A:598 | 29.0 | 0.387 | E | 78.9 | 17.3 |