Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 55233046 . T A CCDS5514.1:NM_005228.3:c.1796gTc>gAc_NP_005219.2:p.599V>D Homo sapiens epidermal growth factor receptor (EGFR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7syd 1 P00533 99.92 0.0 EM
 2021-12-22 VAL A:599 A:575 93.0 0.6 E -61.6 151.6 93.0 0.6 0.0
VAL C:599 B:575 80.0 0.516 -77.1 136.7 80.0 0.516 0.0
7sye 1 P00533 99.92 0.0 EM
 2021-12-22 VAL A:599 A:575 79.0 0.51 E -54.1 147.7 79.0 0.51 0.0
VAL B:599 B:575 80.0 0.516 -77.2 136.7 80.0 0.516 0.0
7sz5 1 P00533 99.92 0.0 EM
 2021-12-22 VAL A:599 A:575 76.0 0.49 E -69.8 149.4 76.0 0.49 0.0
VAL C:599 NA:NA DO NA DO DO DO NA NA NA
7sz7 1 P00533 99.92 0.0 EM
 2021-12-15 VAL A:599 A:575 63.0 0.406 E -86.1 164.6 63.0 0.406 0.0
VAL C:599 B:575 81.0 0.523 -77.1 136.7 81.0 0.523 0.0
7sz0 1 P00533 99.83 0.0 EM
 2021-12-22 VAL A:599 A:575 71.0 0.458 E -56.2 141.2 71.0 0.458 0.0
VAL C:599 B:575 78.0 0.503 -77.2 136.7 78.0 0.503 0.0
7sz1 1 P00533 99.83 0.0 EM
 2021-12-22 VAL A:599 A:575 84.0 0.542 E -78.5 132.4 84.0 0.542 0.0
VAL C:599 B:575 81.0 0.523 -77.1 136.7 81.0 0.523 0.0
5xwd 1 P00533 99.84 0.0 X-RAY
 2018-02-28 VAL A:599 A:575 37.0 0.239 E -78.7 135.6 37.0 0.239 0.0
3qwq 1 P00533 100.0 0.0 X-RAY
 2012-02-01 VAL A:599 A:575 43.0 0.277 E -76.1 141.1 43.0 0.277 0.0
1ivo 1 P00533 100.0 0.0 X-RAY
 2002-10-16 VAL A:575 NA:NA DO NA DO DO DO NA NA NA
VAL B:575 NA:NA DO NA DO DO DO NA NA NA
4uv7 1 P00533 100.0 0.0 X-RAY
 2015-10-14 VAL A:575 A:575 55.0 0.355 E -66.2 155.2 55.0 0.355 0.0 HOH
 3.728
 CG1
 O
3b2v 3 P00533 100.0 0.0 X-RAY
 2008-02-19 VAL C:575 A:575 43.0 0.277 -137.7 104.0 43.0 0.277 0.0
4kro 1 P00533 100.0 0.0 X-RAY
 2013-08-28 VAL A:575 A:575 70.0 0.452 -59.0 133.0 70.0 0.452 0.0
1nql 1 4885199 99.84 0.0 X-RAY
 2003-03-11 VAL A:575 A:575 33.0 0.213 E -92.1 156.0 33.0 0.213 0.0 NAG
 6.902
 O
 O3
4krp 1 P00533 99.84 0.0 X-RAY
 2013-08-28 VAL A:575 A:575 54.0 0.348 -67.9 148.8 54.0 0.348 0.0
1yy9 1 P00533 99.51 0.0 X-RAY
 2005-04-26 VAL A:575 A:575 42.0 0.271 E -73.2 148.5 42.0 0.271 0.0 HOH
 6.130
 CG2
 O
6aru 1 P00533 99.68 0.0 X-RAY
 2018-08-29 VAL A:575 A:575 48.0 0.31 E -75.4 142.5 48.0 0.31 0.0
3njp 1 P00533 99.84 0.0 X-RAY
 2010-10-13 VAL A:575 A:575 83.0 0.535 E -64.3 134.1 83.0 0.535 0.0
VAL B:575 B:575 82.0 0.529 -77.2 136.7 82.0 0.529 0.0
4uip 1 P00533 100.0 0.0 X-RAY
 2015-11-25 VAL A:574 A:575 55.0 0.355 E -89.6 142.4 55.0 0.355 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00533-f1 1 P00533 100.0 0.0 VAL A:599 A:599 50.0 0.323 E -74.9 138.5