Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 6431598 . G A CCDS5348.1:NM_006908.4:c.151Gtg>Atg_NP_008839.2:p.51V>M Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1i4d 2 P63000 100.0 4e-143 X-RAY
2001-05-16 VAL C:51 D:51 2.0 0.013 E -136.8 139.2 2.0 0.013 0.0 HOH
7.660
CG1
O
1i4l 2 P63000 100.0 4e-143 X-RAY
2001-05-16 VAL C:51 D:51 6.0 0.039 E -117.7 137.9 6.0 0.039 0.0 HOH
2.796
CA
O
6tgc 3 P63000 100.0 4e-143 EM
2020-07-29 VAL C:51 C:51 9.0 0.058 E -132.1 154.6 9.0 0.058 0.0
VAL F:51 F:51 10.0 0.065 E -132.1 154.5 10.0 0.065 0.0
5fi0 2 P63000 100.0 6e-143 X-RAY
2016-04-20 VAL B:54 B:51 18.0 0.116 E -115.2 162.6 18.0 0.116 0.0
VAL D:54 D:51 24.0 0.155 E -115.1 161.8 NA NA NA
VAL F:54 F:51 1.0 0.006 E -120.2 166.2 NA NA NA
VAL H:54 H:51 24.0 0.155 E -117.5 165.7 NA NA NA
1i4t 2 P63000 99.48 7e-142 X-RAY
2001-05-16 VAL C:51 D:51 8.0 0.052 E -119.9 130.5 8.0 0.052 0.0 HOH
2.760
CA
O
1e96 1 P15154 99.48 9e-141 X-RAY
2000-11-17 VAL A:51 A:51 1.0 0.006 E -135.0 137.1 1.0 0.006 0.0
1hh4 1 P15154 99.48 9e-141 X-RAY
2001-08-28 VAL A:51 A:51 1.0 0.006 E -145.3 140.9 1.0 0.006 0.0
VAL B:51 B:51 1.0 0.006 E -140.8 147.4 NA NA NA
2vrw 1 P63000 100.0 5e-137 X-RAY
2008-06-17 VAL A:51 A:51 13.0 0.084 E -135.6 133.1 13.0 0.084 0.0 HOH
4.082
CG1
O
1g4u 2 P63000 99.46 6e-136 X-RAY
2001-01-24 VAL B:51 R:51 0.0 0.0 E -139.8 135.1 0.0 0.0 0.0 HOH
7.040
CG1
O
2h7v 1 P63000 99.46 7e-136 X-RAY
2006-09-19 VAL A:55 A:51 1.0 0.006 E -140.0 141.0 1.0 0.006 0.0 HOH
7.873
CG1
O
VAL B:55 B:51 2.0 0.013 E -138.7 148.5 NA NA NA
2p2l 1 P63000 99.46 7e-136 X-RAY
2007-05-01 VAL A:55 A:51 2.0 0.013 E -142.3 133.8 2.0 0.013 0.0 GDP
HOH
8.789
5.616
O
N
O3'
O
VAL B:55 B:51 3.0 0.019 E -133.1 142.0 3.0 0.019 0.0 GDP
HOH
9.193
3.917
O
N
O3'
O
VAL C:55 C:51 1.0 0.006 E -125.9 145.7 1.0 0.006 0.0 GDP
HOH
9.616
3.910
O
N
O3'
O
1mh1 1 P63000 99.45 9e-135 X-RAY
1998-01-21 VAL A:53 A:51 2.0 0.013 E -134.5 141.4 2.0 0.013 0.0 HOH
4.975
N
O
1ds6 1 P15153 92.19 3e-133 X-RAY
2000-07-12 VAL A:51 A:51 1.0 0.006 E -115.7 133.4 1.0 0.006 0.0 HOH
7.102
C
O
2yin 2 P63000 100.0 6e-132 X-RAY
2011-05-25 VAL C:70 C:51 1.0 0.006 E -139.8 141.3 NA NA NA
VAL D:70 D:51 2.0 0.013 E -144.9 163.4 2.0 0.013 0.0 HOH
7.379
CG1
O
3su8 1 P63000 100.0 1e-131 X-RAY
2011-09-28 VAL A:51 A:51 4.0 0.026 E -128.5 125.6 4.0 0.026 0.0
3sua 1 P63000 100.0 1e-131 X-RAY
2011-09-07 VAL A:51 A:51 4.0 0.026 E -130.3 138.2 4.0 0.026 0.0
VAL B:51 B:51 5.0 0.032 E -130.1 138.2 NA NA NA
VAL C:51 C:51 4.0 0.026 E -130.0 138.0 NA NA NA
6x1g 2 P63000 100.0 1e-131 X-RAY
2020-11-25 VAL C:51 B:51 1.0 0.006 E -124.3 122.8 1.0 0.006 0.0 HOH
6.935
C
O
VAL D:51 D:51 3.0 0.019 E -125.1 122.5 NA NA NA
2fju 1 P63000 100.0 1e-131 X-RAY
2006-11-21 VAL A:51 A:51 5.0 0.032 E -129.9 137.7 5.0 0.032 0.0 HOH
7.657
C
O
5qqd 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -142.7 144.0 2.0 0.013 0.0 HOH
6.909
C
O
5qqe 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 1.0 0.006 E -147.8 145.6 1.0 0.006 0.0 HOH
6.309
C
O
5qqf 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -143.4 144.0 2.0 0.013 0.0 HOH
5.882
C
O
5qqg 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -140.2 146.6 2.0 0.013 0.0 HOH
6.211
C
O
5qqh 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 1.0 0.006 E -144.0 151.4 1.0 0.006 0.0 HOH
5.650
C
O
5qqi 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 1.0 0.006 E -149.0 139.2 1.0 0.006 0.0 HOH
6.849
O
O
5qqj 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 1.0 0.006 E -151.9 146.7 1.0 0.006 0.0 HOH
6.416
CG2
O
5qqk 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -144.7 151.2 2.0 0.013 0.0 HOH
5.980
C
O
5qql 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 3.0 0.019 E -144.2 141.2 3.0 0.019 0.0 HOH
6.412
C
O
5qqm 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -144.8 148.0 2.0 0.013 0.0 HOH
6.171
C
O
5qqn 1 P63000 100.0 1e-131 X-RAY
2019-12-18 VAL A:52 A:51 2.0 0.013 E -138.3 145.1 2.0 0.013 0.0 HOH
5.670
C
O
5qu9 1 P63000 100.0 1e-131 X-RAY
2020-01-29 VAL A:52 A:51 4.0 0.026 E -141.5 139.0 4.0 0.026 0.0 HOH
7.024
C
O
1foe 2 P63000 100.0 2e-131 X-RAY
2001-01-17 VAL B:51 B:51 0.0 0.0 E -146.0 157.5 0.0 0.0 0.0 HOH
8.851
C
O
VAL D:51 D:51 0.0 0.0 E -146.1 159.6 NA NA NA
VAL F:51 F:51 0.0 0.0 E -146.4 159.6 NA NA NA
VAL H:51 H:51 0.0 0.0 E -144.3 160.5 NA NA NA
2nz8 1 P63000 100.0 2e-131 X-RAY
2007-04-10 VAL A:51 A:51 2.0 0.013 E -140.5 147.2 2.0 0.013 0.0 HOH
5.180
N
O
3bji 2 P63000 100.0 2e-131 X-RAY
2008-07-15 VAL C:51 C:51 17.0 0.11 E -137.9 139.4 NA NA NA
VAL D:51 D:51 32.0 0.206 E -104.5 146.5 32.0 0.206 0.0 HOH
8.888
CG1
O
5o33 1 P63000 100.0 2e-131 X-RAY
2017-05-31 VAL A:51 A:51 0.0 0.0 E -144.1 150.4 0.0 0.0 0.0 HOH
7.077
C
O
3b13 2 P63000 99.44 4e-131 X-RAY
2012-03-14 VAL B:58 B:51 2.0 0.013 E -149.2 159.7 1.0 0.006 0.007 A:Q92608:0.006
VAL D:58 D:51 0.0 0.0 E -143.6 147.5 0.0 0.0 0.0
7dpa 2 P63000 99.44 6e-131 EM
2021-08-04 VAL B:58 B:51 13.0 0.084 -145.0 173.5 13.0 0.084 0.0
VAL E:58 E:51 11.0 0.071 -145.0 173.5 11.0 0.071 0.0
1ryf 1 P63000 90.55 6e-131 X-RAY
2004-01-27 VAL A:53 A:51 0.0 0.0 E -137.5 139.0 0.0 0.0 0.0 HOH
7.438
O
O
VAL B:53 B:51 1.0 0.006 E -140.6 134.8 NA NA NA
1ryh 1 P63000 90.55 6e-131 X-RAY
2004-01-27 VAL A:53 A:51 0.0 0.0 E -135.5 137.2 0.0 0.0 0.0 HOH
7.143
O
O
VAL B:53 B:51 1.0 0.006 E -133.2 136.8 NA NA NA
3th5 1 P63000 100.0 8e-131 X-RAY
2012-07-18 VAL A:78 A:51 5.0 0.032 E -135.7 127.9 5.0 0.032 0.0
VAL B:78 B:51 5.0 0.032 E -136.8 131.8 NA NA NA
6bc1 1 P63000 100.0 1e-130 X-RAY
2017-12-13 VAL A:51 A:51 2.0 0.013 E -124.7 130.1 2.0 0.013 0.0 HOH
7.870
HB
O
VAL C:51 B:51 1.0 0.006 E -124.3 125.7 NA NA NA
5n6o 1 P63000 100.0 2e-130 X-RAY
2017-12-27 VAL A:50 A:51 12.0 0.077 E -132.6 130.7 12.0 0.077 0.0 HOH
4.750
C
O
VAL B:50 B:51 8.0 0.052 E -136.5 135.1 NA NA NA
4yon 2 P63000 99.44 3e-130 X-RAY
2015-07-01 VAL B:53 B:51 5.0 0.032 E -135.5 144.0 5.0 0.032 0.0 HOH
7.228
O
O
3ryt 2 P63000 99.44 5e-130 X-RAY
2012-01-18 VAL C:54 C:51 23.0 0.148 E -134.4 146.3 23.0 0.148 0.0
4gzm 1 P63000 99.43 6e-130 X-RAY
2012-12-12 VAL A:78 A:51 14.0 0.09 E -130.3 118.7 14.0 0.09 0.0
VAL B:78 B:51 13.0 0.084 E -130.1 118.8 NA NA NA
3sbd 1 P63000 99.43 9e-130 X-RAY
2012-07-18 VAL A:61 A:51 3.0 0.019 E -130.4 129.5 3.0 0.019 0.0 HOH
9.233
CB
O
VAL B:61 B:51 8.0 0.052 E -138.0 132.8 NA NA NA
3sbe 1 P63000 99.43 9e-130 X-RAY
2012-07-18 VAL A:61 A:51 0.0 0.0 E -146.5 124.9 0.0 0.0 0.0 HOH
6.190
N
O
6agp 1 P63000 97.79 1e-129 NMR
2019-03-20 VAL A:51 A:51 0.0 0.0 E -117.7 129.6 0.0 0.0 0.0
1he1 2 P15154 100.0 1e-129 X-RAY
2001-01-02 VAL C:51 C:51 4.0 0.026 E -138.1 134.8 4.0 0.026 0.0 HOH
6.595
C
O
VAL D:51 D:51 6.0 0.039 E -128.7 138.0 NA NA NA
4gzl 1 P63000 99.43 1e-129 X-RAY
2012-12-12 VAL A:78 A:51 14.0 0.09 E -137.8 138.4 14.0 0.09 0.0 HOH
9.142
O
O
VAL B:78 B:51 14.0 0.09 E -144.7 129.2 NA NA NA
7ajk 1 P63000 99.43 3e-129 X-RAY
2020-11-18 VAL A:54 BBB:51 1.0 0.006 E -139.8 125.4 1.0 0.006 0.0 HOH
5.401
C
O
2wkr 1 O49003,P63000 97.21 1e-128 X-RAY
2009-08-18 VAL A:203 A:594 13.0 0.084 E -127.2 139.2 13.0 0.084 0.0 HOH
3.746
C
O
2wkq 1 O49003,P63000 97.21 1e-128 X-RAY
2009-08-18 VAL A:203 A:594 16.0 0.103 E -131.4 134.8 16.0 0.103 0.0 HOH
3.708
CA
O
2wkp 1 O49003,P63000 97.21 3e-128 X-RAY
2009-08-18 VAL A:203 A:594 13.0 0.084 E -131.2 133.3 13.0 0.084 0.0 HOH
3.864
C
O
6tm1 2 P60763 95.51 3e-128 X-RAY
2020-01-22 VAL B:51 A:51 43.0 0.277 E -149.9 154.2 43.0 0.277 0.0
2g0n 1 P60763 95.48 1e-127 X-RAY
2006-05-30 VAL A:52 A:51 2.0 0.013 E -123.6 144.8 2.0 0.013 0.0 HOH
4.347
CA
O
VAL B:52 B:51 6.0 0.039 E -126.7 130.0 NA NA NA
2ov2 1 P60763 95.48 1e-127 X-RAY
2007-03-13 VAL A:52 A:51 0.0 0.0 E -128.1 136.4 0.0 0.0 0.0 HOH
6.807
O
O
VAL B:52 F:51 5.0 0.032 E -129.5 130.2 NA NA NA
VAL C:52 B:51 1.0 0.006 E -133.6 130.6 NA NA NA
VAL D:52 C:51 4.0 0.026 E -129.5 137.6 NA NA NA
VAL E:52 G:51 4.0 0.026 E -130.3 135.1 NA NA NA
VAL F:52 D:51 2.0 0.013 E -133.2 123.6 NA NA NA
VAL G:52 E:51 8.0 0.052 E -126.6 137.6 NA NA NA
VAL H:52 H:51 5.0 0.032 E -128.2 133.3 NA NA NA
2qme 1 P60763 95.48 1e-127 X-RAY
2007-08-28 VAL A:52 A:51 4.0 0.026 E -127.1 132.6 4.0 0.026 0.0 HOH
4.182
CG2
O
2ic5 1 P60763 95.48 1e-127 X-RAY
2006-10-10 VAL A:52 A:51 3.0 0.019 E -124.5 140.6 3.0 0.019 0.0 BTB
HOH
7.114
4.332
O
CG2
O4
O
VAL B:52 B:51 5.0 0.032 E -125.2 132.3 NA NA NA
2c2h 1 P60763 95.48 4e-127 X-RAY
2005-10-13 VAL A:51 A:51 29.0 0.187 E -130.6 133.6 29.0 0.187 0.0 HOH
6.320
C
O
VAL B:51 B:51 18.0 0.116 E -129.9 146.0 NA NA NA
2w2t 1 P15153 94.94 2e-125 X-RAY
2009-05-05 VAL A:57 A:51 15.0 0.097 E -132.5 133.0 15.0 0.097 0.0 HOH
4.053
N
O
2w2x 1 P15153 94.94 2e-125 X-RAY
2009-05-05 VAL A:57 A:51 3.0 0.019 E -124.0 151.3 3.0 0.019 0.0 HOH
8.753
C
O
VAL B:57 B:51 69.0 0.445 360.0 149.3 NA NA NA
2w2v 1 P15153 94.92 1e-124 X-RAY
2009-05-05 VAL A:58 A:51 5.0 0.032 E -129.4 132.2 5.0 0.032 0.0 HOH
6.922
O
O
VAL B:58 B:51 11.0 0.071 E -133.4 128.2 NA NA NA
VAL C:58 C:51 37.0 0.239 360.0 126.1 NA NA NA
VAL D:58 D:51 7.0 0.045 E -137.4 134.9 NA NA NA
5hzh 1 P63000,O49003 92.36 2e-94 X-RAY
2016-12-21 VAL A:203 A:200 24.0 0.155 E -115.0 118.8 24.0 0.155 0.0 HOH
9.435
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p63000-f1 1 P63000 100.0 2e-143 VAL A:51 A:51 1.0 0.006 E -127.4 137.2
af-p15153-f1 1 P15153 92.19 1e-133 VAL A:51 A:51 1.0 0.006 E -126.7 136.0
af-p60763-f1 1 P60763 95.51 1e-128 VAL A:51 A:51 1.0 0.006 E -127.3 136.4