Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98983388 . C A CCDS5661.1:NM_005720.3:c.51aaC>aaA_NP_005711.1:p.17N>K Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 ASN C:17 C:17 12.0 0.075 -72.9 -179.3 12.0 0.075 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 ASN B:17 C:17 22.0 0.138 -77.1 178.3 22.0 0.138 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ASN C:17 C:17 12.0 0.075 -81.1 -177.8 12.0 0.075 0.0 HOH
 6.214
 ND2
 O
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ASN C:17 C:17 18.0 0.113 -78.7 177.3 18.0 0.113 0.0 HOH
 3.546
 CB
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 ASN C:17 C:17 11.0 0.069 -65.9 170.6 11.0 0.069 0.0 HOH
 3.478
 C
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASN C:17 C:17 13.0 0.081 -77.6 -178.3 13.0 0.081 0.0 HOH
 3.580
 ND2
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASN C:17 C:17 12.0 0.075 -88.6 -173.4 12.0 0.075 0.0 HOH
 3.617
 CB
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASN C:17 C:17 8.0 0.05 -77.9 -175.2 8.0 0.05 0.0 HOH
 3.358
 C
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 ASN C:17 C:17 12.0 0.075 -72.8 -179.3 12.0 0.075 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 ASN C:17 C:17 39.0 NA -90.0 179.1 39.0 NA NA
ASN K:17 J:17 97.0 NA -85.1 178.6 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 ASN C:17 C:17 19.0 0.119 -71.3 172.8 19.0 0.119 0.0 HOH
 2.340
 ND2
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 ASN C:17 C:17 12.0 0.075 -81.7 -179.6 12.0 0.075 0.0 HOH
 3.237
 C
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 ASN C:17 C:17 14.0 0.087 -75.7 -176.0 14.0 0.087 0.0 HOH
 3.466
 ND2
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 8.0 0.05 -76.9 -176.8 8.0 0.05 0.0 HOH
 3.195
 C
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 10.0 0.062 -73.7 -177.2 10.0 0.062 0.0 HOH
 3.193
 C
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 15.0 0.094 -77.0 -174.5 15.0 0.094 0.0 HOH
 3.219
 ND2
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 12.0 0.075 -75.3 -177.0 12.0 0.075 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 12.0 0.075 -64.1 177.8 12.0 0.075 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 14.0 0.087 -72.0 177.1 14.0 0.087 0.0 HOH
 3.569
 CG
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASN C:17 C:17 15.0 0.094 -71.9 -175.4 15.0 0.094 0.0 HOH
 3.159
 ND2
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 ASN C:17 C:17 9.0 0.056 -66.1 169.5 9.0 0.056 0.0 HOH
 6.807
 ND2
 O
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 ASN C:17 C:17 2.0 0.013 -108.0 136.9 2.0 0.013 0.0
ASN J:17 V:17 3.0 0.019 -123.6 146.4 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 ASN C:17 c:17 42.0 NA -62.6 149.8 42.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 ASN A:17 A:17 13.0 0.081 -66.9 173.2