Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98983395 . C A CCDS5661.1:NM_005720.3:c.58Cgc>Agc_NP_005711.1:p.20R>S Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 ARG C:20 C:20 97.0 0.431 S 58.5 23.1 97.0 0.431 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 ARG B:20 C:20 64.0 0.284 S 58.8 59.5 64.0 0.284 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ARG C:20 C:20 100.0 0.444 S 58.5 42.3 100.0 0.444 0.0 HOH
 3.266
 NH2
 O
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ARG C:20 C:20 97.0 0.431 S 57.5 37.3 97.0 0.431 0.0 HOH
 6.822
 N
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 ARG C:20 C:20 99.0 0.44 S 52.8 34.5 99.0 0.44 0.0 HOH
 3.506
 NH2
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ARG C:20 C:20 99.0 0.44 S 64.6 39.9 99.0 0.44 0.0 HOH
 3.316
 NH2
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ARG C:20 C:20 98.0 0.436 S 79.4 29.2 98.0 0.436 0.0 HOH
 3.644
 NH2
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ARG C:20 C:20 101.0 0.449 S 46.1 44.5 101.0 0.449 0.0 HOH
 3.810
 NH1
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 ARG C:20 C:20 97.0 0.431 S 58.6 23.0 97.0 0.431 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 ARG C:20 C:20 49.0 NA S 54.4 36.5 49.0 NA NA
ARG K:20 NA:NA DO NA DO DO DO NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 ARG C:20 C:20 99.0 0.44 S 60.4 37.1 99.0 0.44 0.0 HOH
 2.932
 NH2
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 ARG C:20 C:20 99.0 0.44 S 64.1 36.2 99.0 0.44 0.0 HOH
 2.911
 NH1
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 ARG C:20 C:20 101.0 0.449 S 65.1 37.2 101.0 0.449 0.0 HOH
 3.312
 NH2
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 97.0 0.431 S 61.7 36.4 97.0 0.431 0.0 HOH
 3.671
 NH1
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 102.0 0.453 S 58.4 33.7 102.0 0.453 0.0 HOH
 3.608
 NH2
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 99.0 0.44 S 62.4 44.9 99.0 0.44 0.0 HOH
 3.465
 NH2
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 102.0 0.453 S 51.1 42.0 102.0 0.453 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 102.0 0.453 S 69.5 35.1 102.0 0.453 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 97.0 0.431 S 67.6 31.6 97.0 0.431 0.0 HOH
 3.304
 NH1
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ARG C:20 C:20 99.0 0.44 S 53.5 50.1 99.0 0.44 0.0 HOH
 3.848
 NH1
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 ARG C:20 C:20 89.0 0.396 T -45.1 67.9 89.0 0.396 0.0
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 ARG C:20 C:20 62.0 0.276 S 45.1 52.2 62.0 0.276 0.0
ARG J:20 V:20 79.0 0.351 S 45.2 51.2 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 ARG C:20 c:20 67.0 NA S 52.4 46.0 67.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 ARG A:20 A:20 94.0 0.418 S 61.0 26.8