Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98984354 . G A CCDS5661.1:NM_005720.3:c.111aaG>aaA_NP_005711.1:p.37K>K Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 LYS C:37 C:37 101.0 0.505 E -87.1 137.7 101.0 0.505 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 LYS B:37 C:37 107.0 0.535 E -66.0 134.3 107.0 0.535 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 LYS C:37 C:37 100.0 0.5 E -90.7 140.6 100.0 0.5 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 LYS C:37 C:37 99.0 0.495 E -87.6 142.2 99.0 0.495 0.0 HOH
 4.041
 NZ
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 LYS C:37 C:37 106.0 0.53 E -88.7 139.9 106.0 0.53 0.0 HOH
 6.799
 NZ
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:37 C:37 101.0 0.505 E -82.3 146.2 101.0 0.505 0.0 HOH
 2.639
 O
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:37 C:37 97.0 0.485 E -105.2 136.0 97.0 0.485 0.0 HOH
 3.179
 NZ
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:37 C:37 97.0 0.485 E -81.9 139.0 97.0 0.485 0.0 HOH
 2.731
 NZ
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 LYS C:37 C:37 95.0 0.475 E -87.0 137.6 95.0 0.475 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 LYS C:37 C:37 79.0 NA E -125.7 106.2 79.0 NA NA
LYS K:37 J:37 89.0 NA E -90.9 103.3 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 LYS C:37 C:37 98.0 0.49 E -79.7 147.5 98.0 0.49 0.0 HOH
 2.495
 NZ
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 LYS C:37 C:37 97.0 0.485 E -94.9 135.5 97.0 0.485 0.0 HOH
 2.984
 NZ
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 LYS C:37 C:37 100.0 0.5 E -93.1 133.1 100.0 0.5 0.0 HOH
 3.497
 NZ
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 82.0 0.41 E -76.9 132.7 82.0 0.41 0.0 HOH
 5.625
 NZ
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 93.0 0.465 E -85.4 131.2 93.0 0.465 0.0 HOH
 2.783
 NZ
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 92.0 0.46 E -88.2 141.5 92.0 0.46 0.0 HOH
 4.361
 NZ
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 101.0 0.505 E -87.9 140.0 101.0 0.505 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 103.0 0.515 E -89.8 133.4 103.0 0.515 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 105.0 0.525 E -88.6 136.6 105.0 0.525 0.0 HOH
 4.393
 CE
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:37 C:37 101.0 0.505 E -92.6 147.9 101.0 0.505 0.0 HOH
 2.748
 NZ
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 LYS C:37 C:37 121.0 0.605 E -91.5 134.6 121.0 0.605 0.0
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 LYS C:37 C:37 83.0 0.415 -88.7 165.5 83.0 0.415 0.0
LYS J:37 V:37 97.0 0.485 -89.0 159.7 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 LYS C:37 c:37 53.0 NA E -61.1 77.9 53.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 LYS A:37 A:37 108.0 0.54 E -90.3 118.7