Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98985803 . G A CCDS5661.1:NM_005720.3:c.311tGg>tAg_NP_005711.1:p.104W>* Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 TRP C:104 C:104 11.0 0.043 E -54.2 153.4 11.0 0.043 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 TRP B:104 C:104 15.0 0.059 E -77.8 141.9 15.0 0.059 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 TRP C:104 C:104 12.0 0.047 E -71.1 151.7 12.0 0.047 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 TRP C:104 C:104 13.0 0.051 E -75.3 151.4 13.0 0.051 0.0 HOH
 9.329
 NE1
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 TRP C:104 C:104 12.0 0.047 E -66.5 137.3 12.0 0.047 0.0 HOH
 4.638
 O
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 TRP C:104 C:104 15.0 0.059 E -79.9 141.7 15.0 0.059 0.0 HOH
 4.071
 O
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 TRP C:104 C:104 11.0 0.043 E -86.1 148.0 11.0 0.043 0.0 HOH
 6.386
 CB
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 TRP C:104 C:104 13.0 0.051 E -79.9 145.5 13.0 0.051 0.0 HOH
 4.373
 O
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 TRP C:104 C:104 11.0 0.043 E -54.3 153.4 11.0 0.043 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 TRP C:104 C:104 34.0 0.133 E -67.4 156.5 34.0 0.133 0.0
TRP K:104 J:104 125.0 NA 360.0 155.8 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 TRP C:104 C:104 12.0 0.047 E -73.6 138.9 12.0 0.047 0.0 HOH
 3.072
 O
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 TRP C:104 C:104 13.0 0.051 E -75.2 142.6 13.0 0.051 0.0 HOH
 3.406
 CB
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 TRP C:104 C:104 12.0 0.047 E -74.0 152.0 12.0 0.047 0.0 HOH
 4.282
 O
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 12.0 0.047 E -78.8 143.1 12.0 0.047 0.0 HOH
 3.529
 CB
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 12.0 0.047 E -77.0 145.8 12.0 0.047 0.0 HOH
 3.278
 CB
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 12.0 0.047 E -75.6 153.7 12.0 0.047 0.0 HOH
 7.047
 CB
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 11.0 0.043 E -69.7 158.7 11.0 0.043 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 13.0 0.051 E -76.3 141.9 13.0 0.051 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 12.0 0.047 E -77.9 145.6 12.0 0.047 0.0 HOH
 4.191
 O
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 TRP C:104 C:104 12.0 0.047 E -80.2 149.7 12.0 0.047 0.0 HOH
 4.378
 O
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 TRP C:104 C:104 1.0 0.004 -72.9 -96.1 1.0 0.004 0.0 HOH
 7.310
 CH2
 O
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 TRP C:104 C:104 1.0 0.004 -70.8 -105.3 1.0 0.004 0.0
TRP J:104 V:104 2.0 0.008 -75.8 -95.2 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 TRP C:104 c:104 52.0 NA E -52.5 125.8 52.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 TRP A:104 A:104 15.0 0.059 E -63.5 141.3