Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98988554 . C A CCDS5661.1:NM_005720.3:c.539cCg>cAg_NP_005711.1:p.180P>Q Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 PRO C:180 C:180 23.0 0.159 -90.6 143.7 14.0 0.097 0.062 H:Q91YD9:0.062
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 PRO B:180 C:180 27.0 0.186 -76.0 177.4 27.0 0.186 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 PRO C:180 C:180 23.0 0.159 -64.7 139.5 23.0 0.159 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 PRO C:180 C:180 31.0 0.214 -76.1 146.2 31.0 0.214 0.0
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 PRO C:180 C:180 28.0 0.193 -79.3 163.3 28.0 0.193 0.0 HOH
 3.887
 C
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 PRO C:180 C:180 27.0 0.186 -79.1 140.1 27.0 0.186 0.0 HOH
 8.543
 CD
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 PRO C:180 C:180 24.0 0.166 -75.2 146.0 24.0 0.166 0.0 HOH
 4.027
 C
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 PRO C:180 C:180 25.0 0.172 -71.6 141.4 25.0 0.172 0.0 HOH
 3.993
 C
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 PRO C:180 C:180 22.0 0.152 -78.6 148.1 22.0 0.152 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 PRO C:180 C:180 56.0 NA -101.4 133.9 56.0 NA NA
PRO K:180 J:180 53.0 NA -66.4 144.1 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 PRO C:180 C:180 32.0 0.221 -76.5 147.3 32.0 0.221 0.0 HOH
 3.522
 CA
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 PRO C:180 C:180 25.0 0.172 -64.6 146.7 25.0 0.172 0.0 HOH
 7.999
 CD
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 PRO C:180 C:180 26.0 0.179 -80.8 154.4 26.0 0.179 0.0 HOH
 4.236
 CB
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 29.0 0.2 -71.6 147.6 29.0 0.2 0.0 HOH
 4.270
 C
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 29.0 0.2 -70.7 154.2 29.0 0.2 0.0 HOH
 3.606
 CB
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 25.0 0.172 -69.3 145.6 25.0 0.172 0.0 HOH
 9.816
 CB
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 22.0 0.152 -53.5 145.3 22.0 0.152 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 23.0 0.159 -72.3 133.1 23.0 0.159 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 24.0 0.166 -61.7 141.5 24.0 0.166 0.0 HOH
 8.688
 CD
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 PRO C:180 C:180 27.0 0.186 -71.1 144.4 27.0 0.186 0.0 HOH
 4.694
 C
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 PRO C:180 C:180 32.0 0.221 -96.7 -169.0 32.0 0.221 0.0 HOH
 6.513
 C
 O
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 PRO C:180 C:180 17.0 0.117 -61.6 147.0 17.0 0.117 0.0
PRO J:180 V:180 11.0 0.076 -53.3 162.2 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 PRO C:180 c:180 68.0 NA -77.5 178.3 68.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 PRO A:180 A:180 26.0 0.179 -68.2 143.7