Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98988709 . G A CCDS5661.1:NM_005720.3:c.694Gac>Aac_NP_005711.1:p.232D>N Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 ASP C:232 C:232 101.0 0.673 G -65.2 -34.5 101.0 0.673 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 ASP B:232 C:232 95.0 0.633 T -74.0 -34.3 95.0 0.633 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ASP C:232 C:232 96.0 0.64 G -80.3 -15.1 96.0 0.64 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ASP C:232 C:232 86.0 0.573 G -87.8 -1.4 86.0 0.573 0.0
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 ASP C:232 C:232 113.0 0.753 G -69.1 2.9 113.0 0.753 0.0
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASP C:232 C:232 102.0 0.68 G -75.5 20.6 102.0 0.68 0.0 HOH
 2.963
 OD2
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASP C:232 C:232 103.0 0.687 G -99.2 23.7 103.0 0.687 0.0 HOH
 2.729
 OD2
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ASP C:232 C:232 106.0 0.707 G -77.9 10.4 106.0 0.707 0.0 HOH
 3.446
 OD2
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 ASP C:232 C:232 98.0 0.653 G -65.1 -34.7 98.0 0.653 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 ASP C:232 C:232 87.0 NA G -72.5 -23.2 87.0 NA NA
ASP K:232 J:232 84.0 NA G -86.7 1.0 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 ASP C:232 C:232 91.0 0.607 G -86.0 -1.2 91.0 0.607 0.0 HOH
 2.579
 OD2
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 ASP C:232 C:232 109.0 0.727 G -76.7 -23.1 109.0 0.727 0.0 HOH
 6.685
 OD1
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 ASP C:232 C:232 103.0 0.687 G -75.9 -16.6 103.0 0.687 0.0 HOH
 6.920
 OD1
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 104.0 0.693 G -82.3 3.2 104.0 0.693 0.0 HOH
 4.168
 CB
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 102.0 0.68 G -76.7 6.1 102.0 0.68 0.0 HOH
 2.734
 OD2
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 100.0 0.667 G -80.4 10.1 100.0 0.667 0.0 HOH
 3.143
 OD1
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 107.0 0.713 G -92.0 9.8 107.0 0.713 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 101.0 0.673 T -79.7 -26.6 101.0 0.673 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 106.0 0.707 G -78.4 -3.8 106.0 0.707 0.0 HOH
 2.988
 OD1
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ASP C:232 C:232 97.0 0.647 G -85.3 4.1 97.0 0.647 0.0 HOH
 2.919
 OD2
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 ASP C:232 C:232 99.0 0.66 G -88.2 -1.3 99.0 0.66 0.0
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 ASP C:232 C:232 83.0 0.553 T -79.5 -20.9 83.0 0.553 0.0
ASP J:232 V:232 82.0 0.547 T -74.5 -23.6 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 ASP C:232 c:232 87.0 NA T -78.9 -21.3 87.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 ASP A:232 A:232 96.0 0.64 G -66.8 -22.1