Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98988805 . G A CCDS5661.1:NM_005720.3:c.712Gcg>Acg_NP_005711.1:p.238A>T Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 ALA C:238 C:238 5.0 0.043 E -92.3 133.3 5.0 0.043 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 ALA B:238 C:238 18.0 0.157 E -97.0 152.5 18.0 0.157 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ALA C:238 C:238 8.0 0.07 E -91.6 134.2 8.0 0.07 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 ALA C:238 C:238 8.0 0.07 E -98.3 132.7 8.0 0.07 0.0
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 ALA C:238 C:238 9.0 0.078 E -86.8 150.6 9.0 0.078 0.0 HOH
 6.609
 O
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ALA C:238 C:238 8.0 0.07 E -93.7 130.3 8.0 0.07 0.0 HOH
 3.409
 CA
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ALA C:238 C:238 10.0 0.087 E -108.3 137.0 10.0 0.087 0.0 HOH
 3.791
 N
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 ALA C:238 C:238 8.0 0.07 E -85.9 137.6 8.0 0.07 0.0 HOH
 3.543
 CB
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 ALA C:238 C:238 5.0 0.043 E -92.3 133.2 5.0 0.043 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 ALA C:238 C:238 26.0 0.226 E -119.7 113.0 26.0 0.226 0.0
ALA K:238 J:238 73.0 0.635 360.0 130.7 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 ALA C:238 C:238 8.0 0.07 E -92.8 134.8 8.0 0.07 0.0 HOH
 3.436
 CA
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 ALA C:238 C:238 5.0 0.043 E -90.6 143.0 5.0 0.043 0.0 HOH
 3.500
 CA
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 ALA C:238 C:238 8.0 0.07 E -87.2 134.4 8.0 0.07 0.0 HOH
 7.130
 O
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 7.0 0.061 E -94.1 139.3 7.0 0.061 0.0 HOH
 3.790
 N
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 8.0 0.07 E -94.3 143.1 8.0 0.07 0.0 HOH
 3.492
 CA
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 6.0 0.052 E -88.7 145.3 6.0 0.052 0.0 HOH
 3.893
 N
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 10.0 0.087 E -106.4 132.5 10.0 0.087 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 7.0 0.061 E -107.9 116.5 7.0 0.061 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 6.0 0.052 E -105.5 139.9 6.0 0.052 0.0 HOH
 3.363
 CA
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 ALA C:238 C:238 7.0 0.061 E -91.6 138.8 7.0 0.061 0.0 HOH
 3.768
 N
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 ALA C:238 C:238 12.0 0.104 3.3 113.4 12.0 0.104 0.0
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 ALA C:238 C:238 3.0 0.026 E -92.3 -175.3 3.0 0.026 0.0
ALA J:238 V:238 4.0 0.035 -72.4 178.8 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 ALA C:238 c:238 29.0 NA E -144.2 154.4 29.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 ALA A:238 A:238 7.0 0.061 E -83.9 137.1