Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98991711 . T A CCDS5661.1:NM_005720.3:c.1049aTg>aAg_NP_005711.1:p.350M>K Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 MET C:350 C:350 66.0 0.357 T -76.3 -6.3 26.0 0.141 0.216 F:P59998:0.216
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 MET B:350 C:350 83.0 0.449 S -95.3 32.6 32.0 0.173 0.276 G:P59998:0.276
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 MET C:350 C:350 71.0 0.384 T -71.7 6.2 22.0 0.119 0.265 F:Q148J6:0.265
 HOH
 5.672
 N
 O
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 MET C:350 C:350 66.0 0.357 T -72.6 -1.6 15.0 0.081 0.276 F:Q148J6:0.276
 HOH
 5.536
 CE
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 MET C:350 C:350 64.0 0.346 T -59.3 -11.7 16.0 0.086 0.26 F:Q148J6:0.259
 HOH
 2.846
 CE
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 MET C:350 C:350 67.0 0.362 T -66.9 -5.6 17.0 0.092 0.27 F:Q148J6:0.27
 HOH
 2.720
 O
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 MET C:350 C:350 70.0 0.378 T -74.4 -9.9 20.0 0.108 0.27 F:Q148J6:0.27
 HOH
 3.300
 O
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 MET C:350 C:350 72.0 0.389 T -70.9 -5.1 17.0 0.092 0.297 F:Q148J6:0.297
 HOH
 2.808
 O
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 MET C:350 C:350 63.0 0.341 T -76.2 -6.3 14.0 0.076 0.265 F:Q148J6:0.265
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 MET C:350 C:350 40.0 NA T -90.8 16.7 35.0 NA NA F:Q148J6:NA
MET K:350 NA:NA DO NA DO DO DO NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 MET C:350 C:350 66.0 0.357 T -72.9 -9.2 15.0 0.081 0.276 F:Q148J6:0.276
 HOH
 3.068
 O
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 MET C:350 C:350 62.0 0.335 T -67.6 -7.4 17.0 0.092 0.243 F:None:0.243
 HOH
 3.458
 SD
 O
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 MET C:350 C:350 67.0 0.362 T -61.5 -10.1 15.0 0.081 0.281 F:None:0.281
 HOH
 3.236
 SD
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 69.0 0.373 T -65.7 -16.5 17.0 0.092 0.281 F:Q148J6:0.281
 HOH
 3.102
 CE
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 70.0 0.378 T -72.4 -4.2 17.0 0.092 0.286 F:Q148J6:0.286
 HOH
 3.092
 CE
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 65.0 0.351 T -67.9 -6.1 14.0 0.076 0.275 F:Q148J6:0.276
 HOH
 3.291
 SD
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 63.0 0.341 T -66.2 -11.0 14.0 0.076 0.265 F:Q148J6:0.265
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 64.0 0.346 T -72.5 10.9 22.0 0.119 0.227 F:Q148J6:0.227
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 63.0 0.341 T -72.5 2.1 15.0 0.081 0.26 F:Q148J6:0.259
 HOH
 5.152
 CE
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 MET C:350 C:350 67.0 0.362 T -73.0 -1.1 15.0 0.081 0.281 F:Q148J6:0.281
 HOH
 3.115
 CE
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 MET C:350 C:350 87.0 0.47 T -75.7 -5.3 21.0 0.114 0.356 F:Q148J6:0.357
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 MET C:350 C:350 71.0 0.384 S -72.5 -55.4 18.0 0.097 0.287 F:Q148J6:0.286
MET J:350 V:350 70.0 0.378 S -62.0 -78.0 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 MET C:350 c:350 50.0 NA T -57.7 -21.4 50.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 MET A:350 A:350 68.0 0.368 T -71.8 0.1