Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr7 98992102 . A C CCDS5661.1:NM_005720.3:c.1109aAg>aCg_NP_005711.1:p.370K>T Homo sapiens actin related protein 2/3 complex subunit 1B (ARPC1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uhc 3 O15143 100.0 0.0 EM
 2020-07-01 LYS C:370 C:370 146.0 0.73 -124.8 115.2 146.0 0.73 0.0
6yw6 2 O15143 100.0 0.0 EM
 2020-07-22 LYS B:370 C:370 79.0 0.395 -129.5 121.8 79.0 0.395 0.0
3dxk 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 LYS C:370 C:370 90.0 0.45 -103.0 -96.7 90.0 0.45 0.0
3dxm 3 Q58CQ2 95.96 0.0 X-RAY
 2009-07-28 LYS C:370 C:370 83.0 0.415 -87.8 -95.7 83.0 0.415 0.0 HOH
 8.451
 O
 O
3rse 3 Q58CQ2 95.96 0.0 X-RAY
 2011-06-01 LYS C:370 C:370 128.0 0.64 -131.1 101.9 128.0 0.64 0.0 HOH
 8.636
 NZ
 O
3ukr 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:370 C:370 92.0 0.46 -94.8 -99.0 92.0 0.46 0.0 HOH
 8.636
 O
 O
3uku 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:370 C:370 71.0 NA -104.1 84.9 71.0 NA NA HOH
 9.921
 N
 O
3ule 3 Q58CQ2 95.96 0.0 X-RAY
 2013-02-13 LYS C:370 C:370 162.0 0.81 -130.2 103.8 162.0 0.81 0.0 HOH
 2.875
 N
 O
4jd2 3 Q58CQ2 95.96 0.0 X-RAY
 2013-07-17 LYS C:370 C:370 139.0 0.695 -124.8 115.2 139.0 0.695 0.0
6dec 3 Q58CQ2 95.96 0.0 X-RAY
 2018-10-24 LYS C:370 C:370 90.0 NA -96.1 119.6 90.0 NA NA
LYS K:370 J:370 86.0 NA -118.2 129.4 NA NA NA
1k8k 3 Q58CQ2 95.69 0.0 X-RAY
 2001-12-07 LYS C:370 C:370 82.0 0.41 -89.3 -96.6 82.0 0.41 0.0 HOH
 3.792
 NZ
 O
1tyq 3 ? 95.69 0.0 X-RAY
 2004-11-09 LYS C:370 C:370 86.0 0.43 -137.1 103.4 86.0 0.43 0.0
1u2v 3 ? 95.69 0.0 X-RAY
 2004-11-09 LYS C:370 C:370 165.0 0.825 -135.7 100.2 165.0 0.825 0.0 HOH
 8.988
 O
 O
2p9i 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 149.0 0.745 -141.6 115.3 149.0 0.745 0.0 HOH
 9.117
 C
 O
2p9k 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 80.0 0.4 -90.2 -100.1 80.0 0.4 0.0 HOH
 6.253
 O
 O
2p9l 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 129.0 0.645 -118.3 105.8 129.0 0.645 0.0 HOH
 9.630
 C
 O
2p9n 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 83.0 0.415 -135.0 72.5 83.0 0.415 0.0
2p9p 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 83.0 0.415 -99.5 -99.7 83.0 0.415 0.0
2p9s 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 55.0 NA -93.7 -110.6 55.0 NA NA HOH
 8.166
 O
 O
2p9u 3 Q58CQ2 95.69 0.0 X-RAY
 2007-05-29 LYS C:370 C:370 84.0 0.42 -146.1 123.5 84.0 0.42 0.0 HOH
 7.003
 CD
 O
4xei 3 Q58CQ2 95.69 0.0 X-RAY
 2015-09-02 LYS C:370 C:370 124.0 0.62 -92.6 -97.3 124.0 0.62 0.0
4xf2 3 Q58CQ2 95.69 0.0 X-RAY
 2015-11-18 LYS C:370 C:370 111.0 0.555 -91.5 -95.9 111.0 0.555 0.0
LYS J:370 V:370 114.0 0.57 -91.7 -96.0 NA NA NA
7aqk 3 ? 95.69 0.0 EM
 2020-12-02 LYS C:370 c:370 43.0 NA -159.6 118.6 43.0 NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15143-f1 1 O15143 100.0 0.0 LYS A:370 A:370 154.0 0.77 -108.6 98.1