Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 22887123 . C A CCDS6035.1:NM_003842.4:c.476gGg>gTg_NP_003833.4:p.159G>V Homo sapiens TNF receptor superfamily member 10b (TNFRSF10B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3x3f 3 O14763 97.74 2e-94 X-RAY
 2015-12-23 GLY C:106 NA:NA DO NA DO DO DO NA NA NA
1za3 3 O14763 100.0 2e-93 X-RAY
 2005-06-14 GLY C:110 NA:NA DO NA DO DO DO NA NA NA
GLY F:110 S:106 32.0 0.427 S -154.5 -174.9 32.0 0.427 0.0
1d0g 1 O14763 100.0 2e-93 X-RAY
 1999-10-22 GLY A:106 R:106 45.0 0.6 S -157.8 161.2 45.0 0.6 0.0 HOH
 3.915
 N
 O
GLY B:106 S:106 37.0 0.493 S -166.6 158.9 37.0 0.493 0.0 HOH
 2.697
 O
 O
GLY C:106 T:106 40.0 0.533 S -153.0 175.6 40.0 0.533 0.0 HOH
 2.955
 O
 O
1du3 1 O14763 100.0 2e-93 X-RAY
 2000-09-27 GLY A:106 NA:NA DO NA DO DO DO NA NA NA
GLY B:106 B:106 33.0 0.44 S -121.5 -155.4 33.0 0.44 0.0 HOH
 4.527
 C
 O
GLY C:106 NA:NA DO NA DO DO DO NA NA NA
GLY G:106 G:106 41.0 0.547 S -168.9 164.5 NA NA NA
GLY H:106 NA:NA DO NA DO DO DO NA NA NA
GLY I:106 NA:NA DO NA DO DO DO NA NA NA
2h9g 3 O14763 100.0 2e-93 X-RAY
 2006-08-08 GLY C:106 R:106 45.0 0.6 S -146.0 156.3 45.0 0.6 0.0
GLY F:106 NA:NA DO NA DO DO DO NA NA NA
6t3j 5 O14763 100.0 2e-91 X-RAY
 2020-09-16 GLY E:102 E:159 43.0 0.573 S -139.6 165.4 38.0 0.507 0.066 A:None:0.067
GLY J:102 J:159 45.0 0.6 S -135.9 161.7 NA NA NA
4i9x 2 O14763 100.0 2e-91 X-RAY
 2013-04-03 GLY C:102 C:159 33.0 0.44 170.0 -176.0 33.0 0.44 0.0 HOH
 7.941
 N
 O
GLY D:102 D:159 54.0 0.72 -60.6 172.8 54.0 0.72 0.0 HOH
 5.531
 C
 O
4n90 1 O14763 100.0 1e-90 X-RAY
 2014-09-03 GLY A:103 R:106 54.0 0.72 S -74.8 161.1 NA NA NA
GLY B:103 S:106 46.0 0.613 S -95.0 -171.2 NA NA NA
GLY C:103 T:106 51.0 0.68 -88.1 163.9 51.0 0.68 0.0
1d4v 2 2338420 100.0 1e-82 X-RAY
 1999-11-01 GLY B:91 A:159 37.0 0.493 S -149.8 168.1 37.0 0.493 0.0 HOH
 9.089
 O
 O
4od2 3 O14763 100.0 2e-78 X-RAY
 2014-02-05 GLY C:87 S:106 39.0 0.52 S -120.6 168.5 39.0 0.52 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14763-f1 1 O14763 100.0 0.0 GLY A:159 A:159 37.0 0.493 S -173.4 169.1