Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 22887181 . C A CCDS6035.1:NM_003842.4:c.418Gaa>Taa_NP_003833.4:p.140E>* Homo sapiens TNF receptor superfamily member 10b (TNFRSF10B), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3x3f 3 O14763 97.74 2e-94 X-RAY
 2015-12-23 GLU C:87 A:140 85.0 0.447 S -63.5 -174.0 85.0 0.447 0.0
1za3 3 O14763 100.0 2e-93 X-RAY
 2005-06-14 GLU C:91 R:87 136.0 0.716 -83.0 156.6 NA NA NA
GLU F:91 S:87 104.0 0.547 -66.9 155.6 104.0 0.547 0.0
1d0g 1 O14763 100.0 2e-93 X-RAY
 1999-10-22 GLU A:87 R:87 98.0 0.516 -72.1 155.9 98.0 0.516 0.0 HOH
 4.080
 C
 O
GLU B:87 S:87 102.0 0.537 -68.9 154.3 102.0 0.537 0.0 HOH
 3.864
 O
 O
GLU C:87 T:87 74.0 0.389 -65.5 154.3 74.0 0.389 0.0 HOH
 3.895
 CB
 O
1du3 1 O14763 100.0 2e-93 X-RAY
 2000-09-27 GLU A:87 A:87 85.0 0.447 -55.6 164.9 85.0 0.447 0.0 HOH
 5.198
 OE2
 O
GLU B:87 B:87 93.0 0.489 -64.4 168.0 93.0 0.489 0.0 HOH
 3.259
 CB
 O
GLU C:87 C:87 75.0 0.395 -62.1 -175.7 75.0 0.395 0.0 HOH
 6.902
 OE1
 O
GLU G:87 G:87 91.0 0.479 -51.5 164.4 NA NA NA
GLU H:87 H:87 81.0 0.426 -68.8 171.8 NA NA NA
GLU I:87 I:87 71.0 0.374 -74.0 156.2 NA NA NA
2h9g 3 O14763 100.0 2e-93 X-RAY
 2006-08-08 GLU C:87 R:87 113.0 0.595 -64.5 159.8 113.0 0.595 0.0
GLU F:87 NA:NA DO NA DO DO DO NA NA NA
6t3j 5 O14763 100.0 2e-91 X-RAY
 2020-09-16 GLU E:83 E:140 98.0 0.516 47.8 -137.0 98.0 0.516 0.0
GLU J:83 J:140 91.0 0.479 49.6 -135.0 NA NA NA
4i9x 2 O14763 100.0 2e-91 X-RAY
 2013-04-03 GLU C:83 C:140 93.0 0.489 -45.5 148.2 93.0 0.489 0.0 HOH
 7.021
 OE2
 O
GLU D:83 D:140 101.0 0.532 -52.6 147.1 101.0 0.532 0.0 HOH
 3.871
 CA
 O
4n90 1 O14763 100.0 1e-90 X-RAY
 2014-09-03 GLU A:84 R:87 103.0 0.542 -47.3 142.6 NA NA NA
GLU B:84 S:87 96.0 0.505 -59.5 161.2 NA NA NA
GLU C:84 T:87 89.0 0.468 -48.7 164.6 25.0 0.132 0.336 F:P50591:0.011
K:None:0.332
1d4v 2 2338420 100.0 1e-82 X-RAY
 1999-11-01 GLU B:72 A:140 98.0 0.516 -75.8 149.0 98.0 0.516 0.0 HOH
 3.940
 CA
 O
4od2 3 O14763 100.0 2e-78 X-RAY
 2014-02-05 GLU C:68 S:87 100.0 0.526 -68.4 173.6 22.0 0.116 0.41 B:None:0.405
A:None:0.021

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14763-f1 1 O14763 100.0 0.0 GLU A:140 A:140 90.0 0.474 -57.1 156.0