Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 22887207 . G A CCDS6035.1:NM_003842.4:c.392aCg>aTg_NP_003833.4:p.131T>M Homo sapiens TNF receptor superfamily member 10b (TNFRSF10B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3x3f 3 O14763 97.74 2e-94 X-RAY
 2015-12-23 THR C:78 A:131 31.0 0.221 T -65.7 -19.3 31.0 0.221 0.0 HOH
 2.695
 OG1
 O
1za3 3 O14763 100.0 2e-93 X-RAY
 2005-06-14 THR C:82 R:78 44.0 0.314 S -72.4 -45.8 NA NA NA
THR F:82 S:78 30.0 0.214 S -67.9 -39.6 30.0 0.214 0.0
1d0g 1 O14763 100.0 2e-93 X-RAY
 1999-10-22 THR A:78 R:78 32.0 0.229 S -64.4 -7.2 32.0 0.229 0.0 HOH
 3.547
 N
 O
THR B:78 S:78 36.0 0.257 S -60.7 -20.1 36.0 0.257 0.0 HOH
 3.111
 OG1
 O
THR C:78 T:78 37.0 0.264 S -65.4 -19.6 37.0 0.264 0.0 HOH
 7.099
 C
 O
1du3 1 O14763 100.0 2e-93 X-RAY
 2000-09-27 THR A:78 A:78 40.0 0.286 S -71.3 -6.2 40.0 0.286 0.0 HOH
 3.410
 OG1
 O
THR B:78 B:78 39.0 0.279 T -71.7 -0.3 39.0 0.279 0.0 HOH
 3.682
 N
 O
THR C:78 C:78 26.0 0.186 T -63.0 3.1 26.0 0.186 0.0
THR G:78 G:78 37.0 0.264 T -61.3 -2.4 NA NA NA
THR H:78 H:78 43.0 0.307 T -76.7 16.1 NA NA NA
THR I:78 I:78 39.0 0.279 S -81.6 -4.6 NA NA NA
2h9g 3 O14763 100.0 2e-93 X-RAY
 2006-08-08 THR C:78 R:78 31.0 0.221 S -69.5 -26.1 31.0 0.221 0.0 HOH
 6.938
 O
 O
THR F:78 S:78 41.0 0.293 S -70.2 -29.4 NA NA NA
6t3j 5 O14763 100.0 2e-91 X-RAY
 2020-09-16 THR E:74 E:131 37.0 0.264 S -74.0 -20.9 37.0 0.264 0.0
THR J:74 J:131 36.0 0.257 S -72.5 -21.0 NA NA NA
4i9x 2 O14763 100.0 2e-91 X-RAY
 2013-04-03 THR C:74 C:131 37.0 0.264 T -69.0 -4.5 37.0 0.264 0.0 HOH
 3.336
 N
 O
THR D:74 D:131 35.0 0.25 T -61.0 -0.9 35.0 0.25 0.0 CA
HOH
 3.387
2.691
 N
OG1
 CA
O
4n90 1 O14763 100.0 1e-90 X-RAY
 2014-09-03 THR A:75 R:78 29.0 0.207 S -79.0 -15.7 NA NA NA
THR B:75 S:78 31.0 0.221 S -87.5 -4.0 NA NA NA
THR C:75 T:78 34.0 0.243 S -128.3 -13.6 34.0 0.243 0.0
1d4v 2 2338420 100.0 1e-82 X-RAY
 1999-11-01 THR B:63 A:131 37.0 0.264 S -63.6 -8.4 37.0 0.264 0.0 HOH
 3.042
 OG1
 O
4od2 3 O14763 100.0 2e-78 X-RAY
 2014-02-05 THR C:59 S:78 32.0 0.229 S -89.3 -34.7 32.0 0.229 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14763-f1 1 O14763 100.0 0.0 THR A:131 A:131 35.0 0.25 T -60.8 -21.7