Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 22900654 . G A CCDS6035.1:NM_003842.4:c.247Cct>Tct_NP_003833.4:p.83P>S Homo sapiens TNF receptor superfamily member 10b (TNFRSF10B), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3x3f 3 O14763 97.74 2e-94 X-RAY
 2015-12-23 PRO C:30 A:83 41.0 0.283 T -45.1 146.5 41.0 0.283 0.0 HOH
 2.765
 O
 O
1za3 3 O14763 100.0 2e-93 X-RAY
 2005-06-14 PRO C:34 R:30 41.0 0.283 T -51.8 142.7 NA NA NA
PRO F:34 S:30 39.0 0.269 T -45.1 145.6 39.0 0.269 0.0
1d0g 1 O14763 100.0 2e-93 X-RAY
 1999-10-22 PRO A:30 R:30 38.0 0.262 T -54.0 145.2 38.0 0.262 0.0 HOH
 4.779
 CG
 O
PRO B:30 S:30 43.0 0.297 T -54.7 144.4 43.0 0.297 0.0 HOH
 4.698
 O
 O
PRO C:30 T:30 44.0 0.303 T -50.5 142.4 44.0 0.303 0.0 HOH
 5.289
 CG
 O
1du3 1 O14763 100.0 2e-93 X-RAY
 2000-09-27 PRO A:30 A:30 42.0 0.29 T -54.3 150.4 42.0 0.29 0.0 HOH
 5.377
 O
 O
PRO B:30 B:30 47.0 0.324 T -36.9 156.6 47.0 0.324 0.0 HOH
 3.548
 CB
 O
PRO C:30 C:30 46.0 0.317 T -59.4 116.8 46.0 0.317 0.0
PRO G:30 G:30 42.0 0.29 T -47.9 164.6 NA NA NA
PRO H:30 H:30 48.0 0.331 T -45.5 134.1 NA NA NA
PRO I:30 I:30 43.0 0.297 T -44.2 160.0 NA NA NA
2h9g 3 O14763 100.0 2e-93 X-RAY
 2006-08-08 PRO C:30 R:30 43.0 0.297 T -55.3 142.0 43.0 0.297 0.0 HOH
 7.210
 CA
 O
PRO F:30 S:30 42.0 0.29 T -54.3 135.6 NA NA NA
6t3j 5 O14763 100.0 2e-91 X-RAY
 2020-09-16 PRO E:26 E:83 42.0 0.29 T -60.3 154.6 42.0 0.29 0.0
PRO J:26 J:83 39.0 0.269 T -61.8 155.3 NA NA NA
4i9x 2 O14763 100.0 2e-91 X-RAY
 2013-04-03 PRO C:26 C:83 37.0 0.255 T -44.9 145.1 35.0 0.241 0.014 B:Q6RJQ3:0.014
 HOH
 4.316
 CB
 O
PRO D:26 D:83 41.0 0.283 T -44.9 140.9 41.0 0.283 0.0 HOH
 2.602
 O
 O
4n90 1 O14763 100.0 1e-90 X-RAY
 2014-09-03 PRO A:27 R:30 39.0 0.269 T -36.7 131.6 NA NA NA
PRO B:27 S:30 44.0 0.303 T -33.8 122.4 NA NA NA
PRO C:27 T:30 42.0 0.29 T -47.9 159.7 42.0 0.29 0.0
1d4v 2 2338420 100.0 1e-82 X-RAY
 1999-11-01 PRO B:15 A:83 43.0 0.297 T -53.7 142.4 43.0 0.297 0.0 HOH
 4.383
 CB
 O
4od2 3 O14763 100.0 2e-78 X-RAY
 2014-02-05 PRO C:11 S:30 43.0 0.297 T -47.4 145.6 43.0 0.297 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14763-f1 1 O14763 100.0 0.0 PRO A:83 A:83 40.0 0.276 T -48.4 141.9