Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr8 | 54963720 | . | A | C | CCDS6157.1:NM_006330.3:c.491aTt>aGt_NP_006321.1:p.164I>S | Homo sapiens lysophospholipase I (LYPLA1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5sym | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2016-10-26 | ILE | A:164 | A:164 | 6.0 | 0.034 | -62.8 | 139.8 | 6.0 | 0.034 | 0.0 |
HOH |
2.658 |
O |
O |
|||
| ILE | B:164 | B:164 | 6.0 | 0.034 | -65.8 | 141.6 | NA | NA | NA | ||||||||||||||
| 6qgs | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2020-02-05 | ILE | A:167 | B:164 | 8.0 | 0.046 | -67.2 | 146.7 | 8.0 | 0.046 | 0.0 |
HOH |
4.148 |
N |
O |
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| ILE | B:167 | D:164 | 6.0 | 0.034 | -65.2 | 138.0 | NA | NA | NA | ||||||||||||||
| ILE | C:167 | A:164 | 5.0 | 0.029 | -65.6 | 136.2 | NA | NA | NA | ||||||||||||||
| ILE | D:167 | C:164 | 7.0 | 0.04 | -66.0 | 130.5 | NA | NA | NA | ||||||||||||||
| ILE | E:167 | E:164 | 7.0 | 0.04 | -64.8 | 152.5 | NA | NA | NA | ||||||||||||||
| ILE | F:167 | F:164 | 6.0 | 0.034 | -68.8 | 134.9 | NA | NA | NA | ||||||||||||||
| 6qgo | 1 | O75608 | 99.57 | 3e-173 |
X-RAY |
2020-02-05 | ILE | A:167 | B:164 | 7.0 | 0.04 | -68.8 | 142.1 | 7.0 | 0.04 | 0.0 |
HOH |
3.665 |
CG1 |
O |
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| ILE | B:167 | C:164 | 6.0 | 0.034 | -71.9 | 139.3 | NA | NA | NA | ||||||||||||||
| 6qgq | 2 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | B:167 | B:164 | 6.0 | 0.034 | -64.0 | 145.0 | NA | NA | NA | |||||||
| 6qgn | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:167 | A:164 | 10.0 | 0.057 | -58.7 | 148.4 | 10.0 | 0.057 | 0.0 |
HOH |
2.711 |
O |
O |
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| ILE | B:167 | B:164 | 8.0 | 0.046 | -67.0 | 142.3 | NA | NA | NA | ||||||||||||||
| ILE | C:167 | C:164 | 9.0 | 0.051 | -65.2 | 141.0 | NA | NA | NA | ||||||||||||||
| ILE | D:167 | D:164 | 8.0 | 0.046 | -73.2 | 147.0 | NA | NA | NA | ||||||||||||||
| 6qgq | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:167 | A:164 | 8.0 | 0.046 | -60.5 | 146.9 | 8.0 | 0.046 | 0.0 |
HOH |
2.593 |
O |
O |
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| ILE | C:167 | C:164 | 6.0 | 0.034 | -68.3 | 130.9 | NA | NA | NA | ||||||||||||||
| ILE | D:167 | D:164 | 10.0 | 0.057 | -65.3 | 136.6 | NA | NA | NA | ||||||||||||||
| 1fj2 | 1 | O75608 | 100.0 | 9e-169 |
X-RAY |
2000-11-29 | ILE | A:166 | A:159 | 8.0 | 0.046 | -74.0 | 148.5 | 8.0 | 0.046 | 0.0 |
BR BR HOH |
6.746 6.519 2.749 |
N C O |
BR BR O |
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| ILE | B:166 | B:159 | 8.0 | 0.046 | -72.1 | 146.4 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o75608-f1 | 1 | O75608 | 100.0 | 4e-174 | ILE | A:164 | A:164 | 6.0 | 0.034 | -61.7 | 140.1 | ||