Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr8 | 54965220 | . | G | A | CCDS6157.1:NM_006330.3:c.457Cca>Tca_NP_006321.1:p.153P>S | Homo sapiens lysophospholipase I (LYPLA1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5sym | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2016-10-26 | PRO | A:153 | A:153 | 61.0 | 0.421 | -67.6 | 166.4 | 61.0 | 0.421 | 0.0 |
HOH |
2.729 |
HB2 |
O |
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| PRO | B:153 | B:153 | 67.0 | 0.462 | -68.5 | 162.5 | NA | NA | NA | ||||||||||||||
| 6qgs | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2020-02-05 | PRO | A:156 | B:153 | 104.0 | 0.717 | -59.1 | 166.4 | 104.0 | 0.717 | 0.0 |
HOH |
2.197 |
O |
O |
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| PRO | B:156 | D:153 | 92.0 | 0.634 | -76.4 | -163.2 | NA | NA | NA | ||||||||||||||
| PRO | C:156 | A:153 | 98.0 | 0.676 | -63.9 | 155.8 | NA | NA | NA | ||||||||||||||
| PRO | D:156 | C:153 | 71.0 | 0.49 | -65.3 | 173.3 | NA | NA | NA | ||||||||||||||
| PRO | E:156 | E:153 | 106.0 | 0.731 | -62.9 | 161.2 | NA | NA | NA | ||||||||||||||
| PRO | F:156 | F:153 | 79.0 | 0.545 | -64.5 | 172.7 | NA | NA | NA | ||||||||||||||
| 6qgo | 1 | O75608 | 99.57 | 3e-173 |
X-RAY |
2020-02-05 | PRO | A:156 | B:153 | 66.0 | 0.455 | -58.8 | 165.5 | 66.0 | 0.455 | 0.0 | |||||||
| PRO | B:156 | C:153 | 75.0 | 0.517 | -63.2 | 145.0 | NA | NA | NA | ||||||||||||||
| 6qgq | 2 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | PRO | B:156 | B:153 | 62.0 | 0.428 | -62.2 | 169.0 | NA | NA | NA | |||||||
| 6qgn | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | PRO | A:156 | A:153 | 105.0 | 0.724 | -60.0 | 167.7 | 105.0 | 0.724 | 0.0 |
HOH |
2.521 |
O |
O |
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| PRO | B:156 | B:153 | 100.0 | 0.69 | -76.0 | 174.8 | NA | NA | NA | ||||||||||||||
| PRO | C:156 | C:153 | 108.0 | 0.745 | -56.9 | 148.3 | NA | NA | NA | ||||||||||||||
| PRO | D:156 | D:153 | 97.0 | 0.669 | -52.3 | 158.4 | NA | NA | NA | ||||||||||||||
| 6qgq | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | PRO | A:156 | A:153 | 99.0 | 0.683 | -55.5 | 166.0 | 99.0 | 0.683 | 0.0 |
HOH |
7.011 |
O |
O |
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| PRO | C:156 | C:153 | 95.0 | 0.655 | -54.2 | 163.5 | NA | NA | NA | ||||||||||||||
| PRO | D:156 | D:153 | 64.0 | 0.441 | -62.7 | 167.0 | NA | NA | NA | ||||||||||||||
| 1fj2 | 1 | O75608 | 100.0 | 9e-169 |
X-RAY |
2000-11-29 | PRO | A:155 | A:148 | 53.0 | 0.366 | -52.4 | 152.7 | 53.0 | 0.366 | 0.0 |
BR HOH |
9.856 2.836 |
N O |
BR O |
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| PRO | B:155 | B:148 | 100.0 | 0.69 | -42.3 | 139.9 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o75608-f1 | 1 | O75608 | 100.0 | 4e-174 | PRO | A:153 | A:153 | 64.0 | 0.441 | -58.4 | 159.5 | ||