Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr8 | 54967638 | . | A | C | CCDS6157.1:NM_006330.3:c.342atT>atG_NP_006321.1:p.114I>M | Homo sapiens lysophospholipase I (LYPLA1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5sym | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2016-10-26 | ILE | A:114 | A:114 | 0.0 | 0.0 | E | -108.3 | 136.3 | 0.0 | 0.0 | 0.0 |
HOH |
6.973 |
HG12 |
O |
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| ILE | B:114 | B:114 | 0.0 | 0.0 | E | -106.0 | 137.8 | NA | NA | NA | |||||||||||||
| 6qgs | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2020-02-05 | ILE | A:117 | B:114 | 0.0 | 0.0 | E | -104.9 | 130.8 | 0.0 | 0.0 | 0.0 |
HOH |
8.189 |
CD1 |
O |
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| ILE | B:117 | D:114 | 0.0 | 0.0 | E | -114.9 | 130.6 | NA | NA | NA | |||||||||||||
| ILE | C:117 | A:114 | 0.0 | 0.0 | E | -107.3 | 119.8 | NA | NA | NA | |||||||||||||
| ILE | D:117 | C:114 | 0.0 | 0.0 | E | -104.5 | 132.9 | NA | NA | NA | |||||||||||||
| ILE | E:117 | E:114 | 0.0 | 0.0 | E | -108.5 | 130.5 | NA | NA | NA | |||||||||||||
| ILE | F:117 | F:114 | 0.0 | 0.0 | E | -101.2 | 129.0 | NA | NA | NA | |||||||||||||
| 6qgo | 1 | O75608 | 99.57 | 3e-173 |
X-RAY |
2020-02-05 | ILE | A:117 | B:114 | 0.0 | 0.0 | E | -99.2 | 135.2 | 0.0 | 0.0 | 0.0 |
HOH |
7.985 |
CD1 |
O |
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| ILE | B:117 | C:114 | 0.0 | 0.0 | E | -105.3 | 129.8 | NA | NA | NA | |||||||||||||
| 6qgq | 2 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | B:117 | B:114 | 0.0 | 0.0 | E | -100.9 | 130.4 | NA | NA | NA | ||||||
| 6qgn | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:117 | A:114 | 0.0 | 0.0 | E | -105.0 | 127.1 | 0.0 | 0.0 | 0.0 |
HOH |
7.469 |
CG1 |
O |
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| ILE | B:117 | B:114 | 0.0 | 0.0 | E | -98.9 | 132.8 | NA | NA | NA | |||||||||||||
| ILE | C:117 | C:114 | 0.0 | 0.0 | E | -102.2 | 129.1 | NA | NA | NA | |||||||||||||
| ILE | D:117 | D:114 | 0.0 | 0.0 | E | -107.5 | 126.9 | NA | NA | NA | |||||||||||||
| 6qgq | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:117 | A:114 | 0.0 | 0.0 | E | -109.8 | 136.8 | 0.0 | 0.0 | 0.0 |
HOH |
9.781 |
CD1 |
O |
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| ILE | C:117 | C:114 | 0.0 | 0.0 | E | -103.4 | 127.0 | NA | NA | NA | |||||||||||||
| ILE | D:117 | D:114 | 0.0 | 0.0 | E | -109.0 | 130.3 | NA | NA | NA | |||||||||||||
| 1fj2 | 1 | O75608 | 100.0 | 9e-169 |
X-RAY |
2000-11-29 | ILE | A:116 | A:109 | 0.0 | 0.0 | E | -100.7 | 133.3 | 0.0 | 0.0 | 0.0 |
BR HOH |
9.516 6.891 |
CD1 CD1 |
BR O |
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| ILE | B:116 | B:109 | 0.0 | 0.0 | E | -95.6 | 135.1 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o75608-f1 | 1 | O75608 | 100.0 | 4e-174 | ILE | A:114 | A:114 | 0.0 | 0.0 | E | -97.9 | 129.7 | |