Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr8 | 54978329 | . | A | C | CCDS6157.1:NM_006330.3:c.146aTc>aGc_NP_006321.1:p.49I>S | Homo sapiens lysophospholipase I (LYPLA1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5sym | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2016-10-26 | ILE | A:49 | A:49 | 0.0 | 0.0 | E | -118.6 | 136.6 | 0.0 | 0.0 | 0.0 |
EDO CL CL HOH |
7.621 7.408 6.812 2.919 |
HA C HG12 O |
O1 CL CL O |
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| ILE | B:49 | B:49 | 0.0 | 0.0 | E | -113.7 | 139.7 | NA | NA | NA | |||||||||||||
| 6qgs | 1 | O75608 | 100.0 | 9e-174 |
X-RAY |
2020-02-05 | ILE | A:52 | B:49 | 0.0 | 0.0 | E | -113.8 | 134.2 | 0.0 | 0.0 | 0.0 |
HOH |
4.564 |
CD1 |
O |
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| ILE | B:52 | D:49 | 11.0 | 0.063 | E | -110.1 | 135.3 | NA | NA | NA | |||||||||||||
| ILE | C:52 | A:49 | 0.0 | 0.0 | E | -112.1 | 132.0 | NA | NA | NA | |||||||||||||
| ILE | D:52 | C:49 | 0.0 | 0.0 | E | -107.0 | 131.3 | NA | NA | NA | |||||||||||||
| ILE | E:52 | E:49 | 1.0 | 0.006 | E | -118.2 | 139.5 | NA | NA | NA | |||||||||||||
| ILE | F:52 | F:49 | 0.0 | 0.0 | E | -118.8 | 134.4 | NA | NA | NA | |||||||||||||
| 6qgo | 1 | O75608 | 99.57 | 3e-173 |
X-RAY |
2020-02-05 | ILE | A:52 | B:49 | 0.0 | 0.0 | E | -112.0 | 126.5 | 0.0 | 0.0 | 0.0 |
HOH |
4.406 |
CD1 |
O |
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| ILE | B:52 | C:49 | 0.0 | 0.0 | E | -112.7 | 132.7 | NA | NA | NA | |||||||||||||
| 6qgq | 2 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | B:52 | B:49 | 0.0 | 0.0 | E | -108.8 | 127.9 | NA | NA | NA | ||||||
| 6qgn | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:52 | A:49 | 0.0 | 0.0 | E | -119.8 | 127.6 | 0.0 | 0.0 | 0.0 |
HOH |
4.279 |
CD1 |
O |
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| ILE | B:52 | B:49 | 0.0 | 0.0 | E | -114.7 | 136.9 | NA | NA | NA | |||||||||||||
| ILE | C:52 | C:49 | 1.0 | 0.006 | E | -111.5 | 132.6 | NA | NA | NA | |||||||||||||
| ILE | D:52 | D:49 | 0.0 | 0.0 | E | -108.6 | 133.0 | NA | NA | NA | |||||||||||||
| 6qgq | 1 | O75608 | 99.57 | 1e-172 |
X-RAY |
2020-02-05 | ILE | A:52 | A:49 | 1.0 | 0.006 | E | -109.2 | 131.7 | 1.0 | 0.006 | 0.0 |
HOH |
5.854 |
N |
O |
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| ILE | C:52 | C:49 | 0.0 | 0.0 | E | -110.1 | 146.6 | NA | NA | NA | |||||||||||||
| ILE | D:52 | D:49 | 0.0 | 0.0 | E | -109.1 | 138.6 | NA | NA | NA | |||||||||||||
| 1fj2 | 1 | O75608 | 100.0 | 9e-169 |
X-RAY |
2000-11-29 | ILE | A:51 | A:44 | 0.0 | 0.0 | E | -112.4 | 138.6 | 0.0 | 0.0 | 0.0 |
BR BR BR HOH |
7.181 6.094 8.683 2.995 |
N O C O |
BR BR BR O |
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| ILE | B:51 | B:44 | 0.0 | 0.0 | E | -115.6 | 132.0 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-o75608-f1 | 1 | O75608 | 100.0 | 4e-174 | ILE | A:49 | A:49 | 1.0 | 0.006 | E | -110.7 | 131.0 | |