Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 61497326 . G A CCDS6175.1:NM_002865.2:c.314cGc>cAc_NP_002856.1:p.105R>H Homo sapiens RAB2A, member RAS oncogene family (RAB2A), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1z0a 1 P61019 100.0 1e-124 X-RAY
 2005-07-26 ARG A:109 A:105 116.0 0.516 H -56.1 -50.0 116.0 0.516 0.0 HOH
 2.777
 NE
 O
ARG B:109 B:105 119.0 0.529 H -66.6 -30.6 NA NA NA
ARG C:109 C:105 133.0 0.591 H -64.1 -35.8 NA NA NA
ARG D:109 D:105 62.0 NA H -62.2 -34.3 NA NA NA
4rke 1 O18333 95.35 1e-122 X-RAY
 2014-12-10 ARG A:109 A:105 92.0 0.409 H -82.4 -20.5 92.0 0.409 0.0 1PE
HOH
 9.440
2.758
 N
NH1
 C25
O
2a5j 1 Q8WUD1 93.06 4e-120 X-RAY
 2005-07-19 ARG A:120 A:110 126.0 0.56 H -77.5 -27.3 126.0 0.56 0.0 HOH
 2.558
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61019-f1 1 P61019 100.0 2e-160 ARG A:105 A:105 124.0 0.551 H -67.5 -35.1
af-q8wud1-f1 1 Q8WUD1 83.49 1e-135 ARG A:105 A:105 126.0 0.56 H -69.0 -34.5