Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 61504461 . C A CCDS6175.1:NM_002865.2:c.407gCt>gAt_NP_002856.1:p.136A>D Homo sapiens RAB2A, member RAS oncogene family (RAB2A), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1z0a 1 P61019 100.0 1e-124 X-RAY
 2005-07-26 ALA A:140 A:136 22.0 0.191 H -65.1 -41.7 22.0 0.191 0.0 HOH
 3.637
 CB
 O
ALA B:140 B:136 58.0 0.504 H -66.0 -53.6 NA NA NA
ALA C:140 C:136 59.0 0.513 H -65.7 -38.5 NA NA NA
ALA D:140 D:136 56.0 0.487 H -66.7 -47.4 NA NA NA
4rke 1 O18333 95.35 1e-122 X-RAY
 2014-12-10 ALA A:140 A:136 35.0 0.304 H -69.3 -40.0 35.0 0.304 0.0 1PE
HOH
 5.208
3.344
 N
CB
 C24
O
2a5j 1 Q8WUD1 93.06 4e-120 X-RAY
 2005-07-19 ALA A:151 A:141 39.0 0.339 H -65.5 -42.8 39.0 0.339 0.0 HOH
 2.818
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61019-f1 1 P61019 100.0 2e-160 ALA A:136 A:136 46.0 0.4 H -66.4 -49.6
af-q8wud1-f1 1 Q8WUD1 83.49 1e-135 ALA A:136 A:136 36.0 0.313 H -64.7 -48.5