Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr8 76456180 . C A CCDS6220.2:NM_004133.4:c.223Cgc>Agc_NP_004124.4:p.75R>S Homo sapiens hepatocyte nuclear factor 4 gamma (HNF4G), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 82.97 0.0 X-RAY
 2013-03-20 ARG A:47 A:77 128.0 0.569 H -59.8 -48.7 128.0 0.569 0.0 DG
DG
DT
DC
DA
DT
DT
DT
DG
DA
DC
 8.126
8.043
6.095
6.603
8.799
8.601
4.346
3.265
3.377
6.492
9.025
 N
NH1
NH1
NH1
NH1
CD
NE
CD
NH1
NH1
NH1
 OP2
O6
O4
N4
N1
C2'
C2'
C7
N7
N6
N4
ARG B:47 B:77 115.0 0.511 H -72.9 -28.4 115.0 0.511 0.0 DG
DG
DT
DC
DA
DG
DC
DC
DT
DG
DA
DC
 7.849
8.169
6.349
7.163
8.899
8.413
8.281
4.359
3.263
3.339
6.600
9.432
 N
NH1
NH1
NH1
NH1
NH2
CD
NE
NH2
NH1
NH1
NH1
 OP2
O6
O4
N4
N1
N2
C2'
C2'
C5'
N7
N6
N4
ARG E:47 E:77 141.0 0.627 H -64.3 -46.6 NA NA NA
ARG F:47 F:77 153.0 0.68 H -42.2 -41.5 NA NA NA
3cbb 3 P41235 94.81 6e-51 X-RAY
 2008-10-07 ARG C:29 A:77 136.0 0.604 H -62.0 -39.9 136.0 0.604 0.0 DA
DG
DT
DC
DC
DA
DA
DA
DT
DT
DT
DG
DG
DA
HOH
 9.747
7.707
8.052
6.201
6.368
8.182
9.287
9.908
8.450
4.364
3.048
3.052
6.155
9.000
2.785
 N
N
CG
NH1
NH1
NH1
NH1
NH2
CD
NE
NH2
NH1
NH1
NH1
NH1
 O3'
OP2
C7
N4
N4
N1
N1
C2
C2'
C2'
OP2
N7
O6
N6
O
ARG D:29 B:77 131.0 0.582 H -61.3 -41.6 131.0 0.582 0.0 DA
DG
DT
DT
DC
DA
DG
DA
DC
DT
DG
DA
DA
HOH
 9.849
7.781
7.865
6.348
6.408
8.568
8.997
7.837
4.322
2.886
3.213
5.902
8.935
2.849
 N
N
NH1
NH1
NH1
NH1
NH2
CD
NE
NH2
NH1
NH1
NH1
NH2
 O3'
OP2
O4
O4
N4
N1
N2
C2'
C2'
OP2
N7
N6
N6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14541-f1 1 Q14541 100.0 0.0 ARG A:38 A:38 136.0 0.604 H -66.9 -37.2